RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 DPF2Q92785 391 aa23.97■■□□□ 1.43
CCDC78-204ENST00000439619 DUOX1Q9NRD9 1551 aa23.97■■□□□ 1.43
CCDC78-204ENST00000439619 CNOT7Q9UIV1 285 aaKnown RBP23.97■■□□□ 1.43
CCDC78-204ENST00000439619 ABT1Q9ULW3 272 aaKnown RBP23.97■■□□□ 1.43
CCDC78-204ENST00000439619 H7C1W4 665 aa23.96■■□□□ 1.43
CCDC78-204ENST00000439619 RPS12P25398 132 aaKnown RBP23.96■■□□□ 1.43
CCDC78-204ENST00000439619 GCKRQ14397 625 aa23.96■■□□□ 1.43
CCDC78-204ENST00000439619 DOK7Q18PE1 504 aa23.96■■□□□ 1.43
CCDC78-204ENST00000439619 TTLL11Q8NHH1 800 aa23.96■■□□□ 1.43
CCDC78-204ENST00000439619 ZC3H15Q8WU90 426 aaKnown RBP23.96■■□□□ 1.43
CCDC78-204ENST00000439619 ATP2B4P23634 1241 aa23.95■■□□□ 1.42
CCDC78-204ENST00000439619 RTL9Q8NET4 1388 aa23.94■■□□□ 1.42
CCDC78-204ENST00000439619 LTBP1Q14766 1721 aa23.94■■□□□ 1.42
CCDC78-204ENST00000439619 PSMD14O00487 310 aa23.94■■□□□ 1.42
CCDC78-204ENST00000439619 HSPA1AP0DMV8 641 aaKnown RBP23.94■■□□□ 1.42
CCDC78-204ENST00000439619 HSPA1BP0DMV9 641 aaKnown RBP23.94■■□□□ 1.42
CCDC78-204ENST00000439619 IGHMBP2P38935 993 aaKnown RBP23.94■■□□□ 1.42
CCDC78-204ENST00000439619 MICALL2Q8IY33 904 aa23.94■■□□□ 1.42
CCDC78-204ENST00000439619 GREM2Q9H772 168 aa23.94■■□□□ 1.42
CCDC78-204ENST00000439619 BSDC1Q9NW68 430 aaPredicted RBP23.94■■□□□ 1.42
CCDC78-204ENST00000439619 DEFB115Q30KQ5 88 aa23.93■■□□□ 1.42
CCDC78-204ENST00000439619 TAF1P21675 1872 aa23.93■■□□□ 1.42
CCDC78-204ENST00000439619 RASSF10A6NK89 507 aa23.92■■□□□ 1.42
CCDC78-204ENST00000439619 GPR101Q96P66 508 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-204ENST00000439619 PLA2G12BQ9BX93 195 aa23.92■■□□□ 1.42
CCDC78-204ENST00000439619 ZBTB12Q9Y330 459 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-204ENST00000439619 MPHOSPH8Q99549 860 aa23.91■■□□□ 1.42
CCDC78-204ENST00000439619 SPINK5Q9NQ38 1064 aaPredicted RBP23.91■■□□□ 1.42
CCDC78-204ENST00000439619 PGAP2Q9UHJ9 254 aa23.91■■□□□ 1.42
CCDC78-204ENST00000439619 VEGFBP49765 207 aa23.9■■□□□ 1.42
CCDC78-204ENST00000439619 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
CCDC78-204ENST00000439619 AIDAQ96BJ3 306 aa23.9■■□□□ 1.42
CCDC78-204ENST00000439619 MINPP1Q9UNW1 487 aa23.89■■□□□ 1.41
CCDC78-204ENST00000439619 COL4A1P02462 1669 aa23.89■■□□□ 1.41
CCDC78-204ENST00000439619 TRAF5O00463 557 aa23.88■■□□□ 1.41
CCDC78-204ENST00000439619 ITGA6P23229 1130 aa23.88■■□□□ 1.41
CCDC78-204ENST00000439619 ECE1P42892 770 aa23.88■■□□□ 1.41
CCDC78-204ENST00000439619 PAXIP1Q6ZW49 1069 aaPredicted RBP23.88■■□□□ 1.41
CCDC78-204ENST00000439619 PODNQ7Z5L7 613 aa23.88■■□□□ 1.41
CCDC78-204ENST00000439619 TRPM4Q8TD43 1214 aa23.88■■□□□ 1.41
CCDC78-204ENST00000439619 ANKRD2Q9GZV1 360 aa23.88■■□□□ 1.41
CCDC78-204ENST00000439619 VIL1P09327 827 aaKnown RBP23.87■■□□□ 1.41
CCDC78-204ENST00000439619 ANKRD18BA2A2Z9 1011 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 F6X3S4 739 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 CCT4P50991 539 aaKnown RBP23.86■■□□□ 1.41
CCDC78-204ENST00000439619 HIRAP54198 1017 aaPredicted RBP23.86■■□□□ 1.41
CCDC78-204ENST00000439619 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 SAMD7Q7Z3H4 446 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 AGBL3Q8NEM8 1001 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 DCPSQ96C86 337 aaKnown RBP23.86■■□□□ 1.41
CCDC78-204ENST00000439619 GLIS2Q9BZE0 524 aaPredicted RBP23.86■■□□□ 1.41
CCDC78-204ENST00000439619 KCNQ5Q9NR82 932 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 LEMD3Q9Y2U8 911 aa23.86■■□□□ 1.41
CCDC78-204ENST00000439619 CELF2O95319 508 aaKnown RBP23.85■■□□□ 1.41
CCDC78-204ENST00000439619 CSF1RP07333 972 aa23.85■■□□□ 1.41
CCDC78-204ENST00000439619 CASP7P55210 303 aa23.85■■□□□ 1.41
CCDC78-204ENST00000439619 FAM161AQ3B820 660 aa23.85■■□□□ 1.41
CCDC78-204ENST00000439619 TBC1D10BQ4KMP7 808 aaPredicted RBP23.85■■□□□ 1.41
CCDC78-204ENST00000439619 RBM26Q5T8P6 1007 aaKnown RBP23.85■■□□□ 1.41
CCDC78-204ENST00000439619 C9orf78Q9NZ63 289 aaPredicted RBP23.85■■□□□ 1.41
CCDC78-204ENST00000439619 MED23Q9ULK4 1368 aa23.85■■□□□ 1.41
CCDC78-204ENST00000439619 WDR33Q9C0J8 1336 aaKnown RBP23.84■■□□□ 1.41
CCDC78-204ENST00000439619 SHTN1A0MZ66 631 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 USP17L3A6NCW0 530 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 USP17L4A6NCW7 530 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 E9PSI1 815 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 KCNJ4P48050 445 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 FMR1Q06787 632 aaKnown RBP eCLIP23.84■■□□□ 1.41
CCDC78-204ENST00000439619 CST9Q5W186 159 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 RSBN1LQ6PCB5 846 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-204ENST00000439619 USP17L1Q7RTZ2 530 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 CHMP3Q9Y3E7 222 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 TLL2Q9Y6L7 1015 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 ZNF521Q96K83 1311 aa23.84■■□□□ 1.41
CCDC78-204ENST00000439619 MAP2K1Q02750 393 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-204ENST00000439619 IFIT5Q13325 482 aaKnown RBP23.83■■□□□ 1.41
CCDC78-204ENST00000439619 COL13A1Q5TAT6 717 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-204ENST00000439619 SLC4A10Q6U841 1118 aa23.83■■□□□ 1.41
CCDC78-204ENST00000439619 ZNF408Q9H9D4 720 aa23.83■■□□□ 1.41
CCDC78-204ENST00000439619 GRM8O00222 908 aa23.82■■□□□ 1.4
CCDC78-204ENST00000439619 ALDH1L1O75891 902 aa23.82■■□□□ 1.4
CCDC78-204ENST00000439619 KIF4BQ2VIQ3 1234 aa23.82■■□□□ 1.4
CCDC78-204ENST00000439619 SRCIN1Q9C0H9 1055 aa23.82■■□□□ 1.4
CCDC78-204ENST00000439619 COA1Q9GZY4 146 aa23.82■■□□□ 1.4
CCDC78-204ENST00000439619 KRT26Q7Z3Y9 468 aa23.81■■□□□ 1.4
CCDC78-204ENST00000439619 USP48Q86UV5 1035 aa23.81■■□□□ 1.4
CCDC78-204ENST00000439619 CAPNS2Q96L46 248 aa23.81■■□□□ 1.4
CCDC78-204ENST00000439619 ZNF804BA4D1E1 1349 aa23.81■■□□□ 1.4
CCDC78-204ENST00000439619 USP17L8P0C7I0 530 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 GRM1Q13255 1194 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 CCDC57Q2TAC2 916 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 TAF7LQ5H9L4 462 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 SULF1Q8IWU6 871 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 TNS4Q8IZW8 715 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 BEGAINQ9BUH8 593 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 CACNA1FO60840 1977 aa23.8■■□□□ 1.4
CCDC78-204ENST00000439619 ZNF609O15014 1411 aa23.79■■□□□ 1.4
CCDC78-204ENST00000439619 CTCFP49711 727 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-204ENST00000439619 ZNF280AP59817 542 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-204ENST00000439619 OGFOD1Q8N543 542 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms