RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 BICD2Q8TD16 824 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 DNAJC25Q9H1X3 360 aa17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 ZSCAN16Q9H4T2 348 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP4-202ENST00000439510 JAK2O60674 1132 aa17.98■□□□□ 0.47
CDC42EP4-202ENST00000439510 NCBP1Q09161 790 aaKnown RBP17.98■□□□□ 0.47
CDC42EP4-202ENST00000439510 SARM1Q6SZW1 724 aa17.98■□□□□ 0.47
CDC42EP4-202ENST00000439510 DHX37Q8IY37 1157 aaKnown RBP17.98■□□□□ 0.47
CDC42EP4-202ENST00000439510 LAMA4Q16363 1823 aa17.98■□□□□ 0.47
CDC42EP4-202ENST00000439510 IGKV5-2P06315 115 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 BRF1Q92994 677 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 C16orf45Q96MC5 204 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 NEK1Q96PY6 1258 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 SIL1Q9H173 461 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 CLIP2Q9UDT6 1046 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 PAXBP1Q9Y5B6 917 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 PDIA6Q15084 440 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 CACTINQ8WUQ7 758 aaKnown RBP17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 ATP5JP18859 108 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 IQCB1Q15051 598 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 FEZ1Q99689 392 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 NHSL1Q5SYE7 1610 aa17.97■□□□□ 0.47
CDC42EP4-202ENST00000439510 C5P01031 1676 aa17.96■□□□□ 0.47
CDC42EP4-202ENST00000439510 TNNT1P13805 278 aa17.96■□□□□ 0.47
CDC42EP4-202ENST00000439510 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
CDC42EP4-202ENST00000439510 U2AF2P26368 475 aaKnown RBP eCLIP17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 CCDC144BQ3MJ40 725 aa17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 CCDC144CPQ8IYA2 1237 aa17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 KLHDC4Q8TBB5 520 aa17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 MRFAP1L1Q96HT8 127 aa17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 LLPHQ9BRT6 129 aaKnown RBP17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP4-202ENST00000439510 ZNF609O15014 1411 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 CTAGE5O15320 804 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 Q6ZUG5 572 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 EDC3Q96F86 508 aaKnown RBP17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 COPRSQ9NQ92 184 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 NEURL1BA8MQ27 555 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 H3BQV1 296 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
CDC42EP4-202ENST00000439510 NEMFO60524 1076 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 ANKRD24Q8TF21 1146 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 DBNLQ9UJU6 430 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 SPDYE4A6NLX3 237 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 AIMP1Q12904 312 aaKnown RBP17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 GCKRQ14397 625 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 NAA16Q6N069 864 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 LRRC8AQ8IWT6 810 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 RCOR1Q9UKL0 485 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 SCRN1Q12765 414 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 STX1AQ16623 288 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 EPHA10Q5JZY3 1008 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
CDC42EP4-202ENST00000439510 CYP21A2P08686 494 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 RIC3Q7Z5B4 369 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 GOLGA6L19H0YKK7 550 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 PFKFB2O60825 505 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 NEXNQ0ZGT2 675 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 TPD52L1Q16890 204 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 TNNI3KQ59H18 835 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 C11orf57Q6ZUT1 292 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 CCDC112Q8NEF3 446 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 FPGT-TNNI3KV9GXZ4 949 aa17.92■□□□□ 0.46
CDC42EP4-202ENST00000439510 RFX5P48382 616 aaPredicted RBP17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 OGFRQ9NZT2 677 aa17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 KIF20AO95235 890 aa17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 HSP90B1P14625 803 aaKnown RBP17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
CDC42EP4-202ENST00000439510 MCMDC2Q4G0Z9 681 aa17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 ATL3Q6DD88 541 aa17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 NSUN7Q8NE18 718 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 CGNQ9P2M7 1197 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 HMGB1P09429 215 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 SNW1Q13573 536 aaKnown RBP17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
CDC42EP4-202ENST00000439510 TOM1O60784 492 aa17.89■□□□□ 0.46
CDC42EP4-202ENST00000439510 CEP135Q66GS9 1140 aa17.89■□□□□ 0.46
CDC42EP4-202ENST00000439510 NYAP1Q6ZVC0 841 aa17.89■□□□□ 0.46
CDC42EP4-202ENST00000439510 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.46
CDC42EP4-202ENST00000439510 HAUS7Q99871 368 aa17.89■□□□□ 0.46
CDC42EP4-202ENST00000439510 GOLPH3LQ9H4A5 285 aa17.89■□□□□ 0.46
CDC42EP4-202ENST00000439510 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 CCDC129Q6ZRS4 1044 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 SH3TC1Q8TE82 1336 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 TFCP2Q12800 502 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 AGXT2Q9BYV1 514 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 KCND1Q9NSA2 647 aa17.89■□□□□ 0.45
CDC42EP4-202ENST00000439510 CTDNEP1O95476 244 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms