RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GCKRQ14397 625 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 ERCC6LQ2NKX8 1250 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 CLEC17AQ6ZS10 378 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 SDF4Q9BRK5 362 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 PSMA5P28066 241 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 FAM200AQ8TCP9 573 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 GTPBP4Q9BZE4 634 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 NEURL1BA8MQ27 555 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 ANKRD65E5RJM6 399 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 SLC27A2O14975 620 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 ALDH1L1O75891 902 aa11.66□□□□□ -0.54
CDC42SE1-202ENST00000439374 ME1P48163 572 aa11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 NCOA5Q9HCD5 579 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 OTUD7BQ6GQQ9 843 aa11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 TECPR2O15040 1411 aa11.65□□□□□ -0.54
CDC42SE1-202ENST00000439374 SF3A1Q15459 793 aaKnown RBP11.65□□□□□ -0.55
CDC42SE1-202ENST00000439374 DHX37Q8IY37 1157 aaKnown RBP11.65□□□□□ -0.55
CDC42SE1-202ENST00000439374 LRRN4CLQ8ND94 238 aa11.65□□□□□ -0.55
CDC42SE1-202ENST00000439374 ZCCHC17Q9NP64 241 aaKnown RBP11.65□□□□□ -0.55
CDC42SE1-202ENST00000439374 MTMR6Q9Y217 621 aa11.65□□□□□ -0.55
CDC42SE1-202ENST00000439374 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.55
CDC42SE1-202ENST00000439374 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 PPARDQ03181 441 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 CUL4AQ13619 759 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 Q6ZUG5 572 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 INTS4Q96HW7 963 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 C19orf44Q9H6X5 657 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 AGLP35573 1532 aa11.64□□□□□ -0.55
CDC42SE1-202ENST00000439374 PDILTQ8N807 584 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 KAZALD1Q96I82 304 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 SALL3Q9BXA9 1300 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 CCDC69A6NI79 296 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 SEC31AO94979 1220 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 AOPEPQ8N6M6 819 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 URI1O94763 535 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 PHKG2P15735 406 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-202ENST00000439374 CYP27B1O15528 508 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 C11orf57Q6ZUT1 292 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 NEK1Q96PY6 1258 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 METTL22Q9BUU2 404 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 POLR3DP05423 398 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 ATP2B1P20020 1258 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 CCDC57Q2TAC2 916 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 UVSSAQ2YD98 709 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 TNNI3KQ59H18 835 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 KRT222Q8N1A0 295 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 SYNE4Q8N205 404 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 OGFRQ9NZT2 677 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 KIF20AO95235 890 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 RXRAP19793 462 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 IBSPP21815 317 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 ZNF75DP51815 510 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 MNS1Q8NEH6 495 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 ERBB3P21860 1342 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 KNDC1Q76NI1 1749 aa11.62□□□□□ -0.55
CDC42SE1-202ENST00000439374 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 DNAI1Q9UI46 699 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 HIP1O00291 1037 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 IDH1O75874 414 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 LMOD1P29536 600 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 C10orf67Q8IYJ2 551 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 PHACTR2O75167 634 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 ARHGAP29Q52LW3 1261 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 TEX35Q5T0J7 233 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 UTP14CQ5TAP6 766 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 RABEP2Q9H5N1 569 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 GPHNQ9NQX3 736 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 CTNNA3Q9UI47 895 aa11.61□□□□□ -0.55
CDC42SE1-202ENST00000439374 CPLX1O14810 134 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 DIP2AQ14689 1571 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 RRP12Q5JTH9 1297 aaKnown RBP11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
CDC42SE1-202ENST00000439374 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms