RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 AIMP1Q12904 312 aaKnown RBP8.84□□□□□ -0.99
ERCC8-203ENST00000439176 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 OLFM4Q6UX06 510 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 COPS6Q7L5N1 327 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 NIM1KQ8IY84 436 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 CCDC146Q8IYE0 955 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 SUPT20HQ8NEM7 779 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 VPS33BQ9H267 617 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 DDX21Q9NR30 783 aaKnown RBP eCLIP8.84□□□□□ -0.99
ERCC8-203ENST00000439176 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 NUP98P52948 1817 aa8.84□□□□□ -0.99
ERCC8-203ENST00000439176 ZNF541Q9H0D2 1346 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 SCN4AP35499 1836 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 TMEM88BA6NKF7 163 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 CHL1O00533 1208 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 TCERG1O14776 1098 aaKnown RBP8.83□□□□□ -1
ERCC8-203ENST00000439176 HOXB7P09629 217 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 CALD1Q05682 793 aaKnown RBP8.83□□□□□ -1
ERCC8-203ENST00000439176 TCIRG1Q13488 830 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 DSG2Q14126 1118 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 PDIA6Q15084 440 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 DDX46Q7L014 1031 aaKnown RBP8.83□□□□□ -1
ERCC8-203ENST00000439176 XAGE3Q8WTP9 111 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 NECTIN2Q92692 538 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 CHMP4AQ9BY43 222 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 HCSTQ9UBK5 93 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 DBF4Q9UBU7 674 aaPredicted RBP8.83□□□□□ -1
ERCC8-203ENST00000439176 TRMT112Q9UI30 125 aaKnown RBP8.83□□□□□ -1
ERCC8-203ENST00000439176 ATP6V0A2Q9Y487 856 aa8.83□□□□□ -1
ERCC8-203ENST00000439176 SH3TC1Q8TE82 1336 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 PPIP5K2O43314 1243 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 ANXA1P04083 346 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 HSPA1AP0DMV8 641 aaKnown RBP8.82□□□□□ -1
ERCC8-203ENST00000439176 HSPA1BP0DMV9 641 aaKnown RBP8.82□□□□□ -1
ERCC8-203ENST00000439176 PROSER3Q2NL68 480 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 HDGFL1Q5TGJ6 251 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 TMC4Q7Z404 712 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 CNTROBQ8N137 903 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
ERCC8-203ENST00000439176 ADAMTS8Q9UP79 889 aa8.82□□□□□ -1
ERCC8-203ENST00000439176 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
ERCC8-203ENST00000439176 DPP8Q6V1X1 898 aaPredicted RBP8.81□□□□□ -1
ERCC8-203ENST00000439176 LRP10Q7Z4F1 713 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 NLRP10Q86W26 655 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 SP8Q8IXZ3 490 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 TNS4Q8IZW8 715 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 PLBD2Q8NHP8 589 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 AIDAQ96BJ3 306 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 HYPKQ9NX55 129 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 CHPF2Q9P2E5 772 aa8.81□□□□□ -1
ERCC8-203ENST00000439176 ABCC4O15439 1325 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 PASKQ96RG2 1323 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
ERCC8-203ENST00000439176 HCLS1P14317 486 aaPredicted RBP8.8□□□□□ -1
ERCC8-203ENST00000439176 PLCB2Q00722 1185 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 ARSIQ5FYB1 569 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 COL13A1Q5TAT6 717 aaPredicted RBP8.8□□□□□ -1
ERCC8-203ENST00000439176 MAP1SQ66K74 1059 aaPredicted RBP8.8□□□□□ -1
ERCC8-203ENST00000439176 USP50Q70EL3 339 aaPredicted RBP8.8□□□□□ -1
ERCC8-203ENST00000439176 PLPP6Q8IY26 295 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 MPNDQ8N594 471 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 ZNRF3Q9ULT6 936 aa8.8□□□□□ -1
ERCC8-203ENST00000439176 CNTNAP1P78357 1384 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 GNAI1P63096 354 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 GRAPQ13588 217 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 TNIP1Q15025 636 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 AOC3Q16853 763 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 DEFB115Q30KQ5 88 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 DUSP27Q5VZP5 1158 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 GRAPLQ8TC17 118 aaPredicted RBP8.79□□□□□ -1
ERCC8-203ENST00000439176 PTCD2Q8WV60 388 aaKnown RBP8.79□□□□□ -1
ERCC8-203ENST00000439176 BCL2L13Q9BXK5 485 aa8.79□□□□□ -1
ERCC8-203ENST00000439176 RTFDC1Q9BY42 306 aaPredicted RBP8.79□□□□□ -1
ERCC8-203ENST00000439176 PRKRIP1Q9H875 184 aaPredicted RBP8.79□□□□□ -1
ERCC8-203ENST00000439176 ABT1Q9ULW3 272 aaKnown RBP8.79□□□□□ -1
ERCC8-203ENST00000439176 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
ERCC8-203ENST00000439176 SCNN1DP51172 638 aa8.78□□□□□ -1
ERCC8-203ENST00000439176 KRT24Q2M2I5 525 aa8.78□□□□□ -1
ERCC8-203ENST00000439176 CIAPIN1Q6FI81 312 aa8.78□□□□□ -1
ERCC8-203ENST00000439176 RIC3Q7Z5B4 369 aa8.78□□□□□ -1
ERCC8-203ENST00000439176 LARP6Q9BRS8 491 aaKnown RBP8.78□□□□□ -1
ERCC8-203ENST00000439176 ADARB2Q9NS39 739 aaKnown RBP8.78□□□□□ -1
ERCC8-203ENST00000439176 IFT57Q9NWB7 429 aa8.78□□□□□ -1
ERCC8-203ENST00000439176 SNED1Q8TER0 1413 aa8.78□□□□□ -1
ERCC8-203ENST00000439176 ATP5J2-PTCD1G3V325 749 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 APAF1O14727 1248 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 DDX58O95786 925 aaKnown RBP8.77□□□□□ -1.01
ERCC8-203ENST00000439176 EPS15P42566 896 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 ECE1P42892 770 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 VEGFBP49765 207 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 CXCL9Q07325 125 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 KIAA2012Q0VF49 1180 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 FAM89AQ96GI7 184 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 EYA3Q99504 573 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 ISCA1Q9BUE6 129 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 BEGAINQ9BUH8 593 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
ERCC8-203ENST00000439176 GPRC5DQ9NZD1 345 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms