RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 DDX46Q7L014 1031 aaKnown RBP18.09■□□□□ 0.49
LINC00163-202ENST00000439088 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
LINC00163-202ENST00000439088 MROH5Q6ZUA9 1318 aa18.09■□□□□ 0.49
LINC00163-202ENST00000439088 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
LINC00163-202ENST00000439088 GOLIM4O00461 696 aa18.08■□□□□ 0.49
LINC00163-202ENST00000439088 ADORA1P30542 326 aa18.08■□□□□ 0.49
LINC00163-202ENST00000439088 NECTIN1Q15223 517 aa18.08■□□□□ 0.49
LINC00163-202ENST00000439088 TTC39AQ5SRH9 613 aa18.08■□□□□ 0.49
LINC00163-202ENST00000439088 DDX60Q8IY21 1712 aaKnown RBP18.08■□□□□ 0.48
LINC00163-202ENST00000439088 USPL1Q5W0Q7 1092 aa18.08■□□□□ 0.48
LINC00163-202ENST00000439088 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
LINC00163-202ENST00000439088 ABCC12Q96J65 1359 aa18.08■□□□□ 0.48
LINC00163-202ENST00000439088 ZPR1O75312 459 aa18.07■□□□□ 0.48
LINC00163-202ENST00000439088 RASEFQ8IZ41 740 aa18.07■□□□□ 0.48
LINC00163-202ENST00000439088 LAMB2P55268 1798 aa18.07■□□□□ 0.48
LINC00163-202ENST00000439088 SPEF2Q9C093 1822 aa18.07■□□□□ 0.48
LINC00163-202ENST00000439088 TBC1D9BQ66K14 1250 aa18.07■□□□□ 0.48
LINC00163-202ENST00000439088 LRP5O75197 1615 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 TAF1LQ8IZX4 1826 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 MCMDC2Q4G0Z9 681 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 SLC10A5Q5PT55 438 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 KRT27Q7Z3Y8 459 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 ARHGEF1Q92888 912 aaKnown RBP18.06■□□□□ 0.48
LINC00163-202ENST00000439088 ZNF512BQ96KM6 892 aaPredicted RBP18.06■□□□□ 0.48
LINC00163-202ENST00000439088 MPHOSPH8Q99549 860 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 SEC31BQ9NQW1 1179 aa18.06■□□□□ 0.48
LINC00163-202ENST00000439088 RBM8AQ9Y5S9 174 aaKnown RBP18.06■□□□□ 0.48
LINC00163-202ENST00000439088 FRAT2O75474 233 aaPredicted RBP18.05■□□□□ 0.48
LINC00163-202ENST00000439088 PRPF40BQ6NWY9 871 aaKnown RBP18.05■□□□□ 0.48
LINC00163-202ENST00000439088 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
LINC00163-202ENST00000439088 TAF5LO75529 589 aa18.05■□□□□ 0.48
LINC00163-202ENST00000439088 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
LINC00163-202ENST00000439088 SF3B3Q15393 1217 aaKnown RBP18.05■□□□□ 0.48
LINC00163-202ENST00000439088 ZNF589Q86UQ0 364 aaPredicted RBP18.05■□□□□ 0.48
LINC00163-202ENST00000439088 NYXQ9GZU5 481 aa18.05■□□□□ 0.48
LINC00163-202ENST00000439088 HELLSQ9NRZ9 838 aa18.05■□□□□ 0.48
LINC00163-202ENST00000439088 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
LINC00163-202ENST00000439088 SRP68Q9UHB9 627 aaKnown RBP18.05■□□□□ 0.48
LINC00163-202ENST00000439088 ZKSCAN1P17029 563 aaPredicted RBP18.04■□□□□ 0.48
LINC00163-202ENST00000439088 KCNJ4P48050 445 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 PUM3Q15397 648 aaKnown RBP18.04■□□□□ 0.48
LINC00163-202ENST00000439088 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 LPIN2Q92539 896 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 UPF3BQ9BZI7 483 aaKnown RBP18.04■□□□□ 0.48
LINC00163-202ENST00000439088 TM6SF1Q9BZW5 370 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 FGFR2P21802 821 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 SSFA2P28290 1259 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 FKBP4Q02790 459 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00163-202ENST00000439088 LRRFIP1Q32MZ4 808 aaKnown RBP18.04■□□□□ 0.48
LINC00163-202ENST00000439088 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 CREB3L3Q68CJ9 461 aa18.04■□□□□ 0.48
LINC00163-202ENST00000439088 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
LINC00163-202ENST00000439088 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
LINC00163-202ENST00000439088 RNF113AO15541 343 aaKnown RBP18.03■□□□□ 0.48
LINC00163-202ENST00000439088 RNF20Q5VTR2 975 aa18.03■□□□□ 0.48
LINC00163-202ENST00000439088 TMX3Q96JJ7 454 aa18.03■□□□□ 0.48
LINC00163-202ENST00000439088 LRRC4BQ9NT99 713 aa18.03■□□□□ 0.48
LINC00163-202ENST00000439088 GTF2E1P29083 439 aaPredicted RBP18.02■□□□□ 0.48
LINC00163-202ENST00000439088 ZMYM1Q5SVZ6 1142 aa18.02■□□□□ 0.48
LINC00163-202ENST00000439088 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.48
LINC00163-202ENST00000439088 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.48
LINC00163-202ENST00000439088 RFC4P35249 363 aa18.02■□□□□ 0.47
LINC00163-202ENST00000439088 SLC27A3Q5K4L6 730 aa18.02■□□□□ 0.47
LINC00163-202ENST00000439088 TTC14Q96N46 770 aa18.02■□□□□ 0.47
LINC00163-202ENST00000439088 SLC27A2O14975 620 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 CHGBP05060 677 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 ADRA2BP18089 450 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 SCARF1Q14162 830 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
LINC00163-202ENST00000439088 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
LINC00163-202ENST00000439088 SEC62Q99442 399 aaKnown RBP18.01■□□□□ 0.47
LINC00163-202ENST00000439088 ZSWIM6Q9HCJ5 1215 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 ZFYP08048 801 aaPredicted RBP18.01■□□□□ 0.47
LINC00163-202ENST00000439088 UQCRFS1P1P0C7P4 283 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 SLC5A1P13866 664 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 ZAP70P43403 619 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 CUL4AQ13619 759 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 TSGA10IPQ3SY00 556 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
LINC00163-202ENST00000439088 HMG20BQ9P0W2 317 aa18.01■□□□□ 0.47
LINC00163-202ENST00000439088 BRWD3Q6RI45 1802 aa18■□□□□ 0.47
LINC00163-202ENST00000439088 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
LINC00163-202ENST00000439088 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
LINC00163-202ENST00000439088 CCDC102BQ68D86 513 aa18■□□□□ 0.47
LINC00163-202ENST00000439088 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
LINC00163-202ENST00000439088 U3KPZ7 1027 aaPredicted RBP18■□□□□ 0.47
LINC00163-202ENST00000439088 CASTP20810 708 aaKnown RBP17.99■□□□□ 0.47
LINC00163-202ENST00000439088 PSMA5P28066 241 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 ARID4AP29374 1257 aaPredicted RBP17.99■□□□□ 0.47
LINC00163-202ENST00000439088 MCAMP43121 646 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 TRIM37O94972 964 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 CCDC129Q6ZRS4 1044 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
LINC00163-202ENST00000439088 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms