RNA–Protein interactions for RNA: ENST00000438885.2

LINC01649-201, Transcript of long intergenic non-protein coding RNA 1649, humanhuman

TSL 5

Gene LINC01649, Length 1,498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01649-201ENST00000438885 BECN1Q14457 450 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 MAP7D1Q3KQU3 841 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 ELOA3BQ3SY89 546 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 ELOA3Q8NG57 546 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 ARXQ96QS3 562 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 PRR12Q9ULL5 1215 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 ASXL2Q76L83 1435 aa6.56□□□□□ -1.36
LINC01649-201ENST00000438885 EIF3AQ14152 1382 aaKnown RBP6.56□□□□□ -1.36
LINC01649-201ENST00000438885 SUPT6HQ7KZ85 1726 aaKnown RBP6.56□□□□□ -1.36
LINC01649-201ENST00000438885 ALAS2P22557 587 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 MRE11P49959 708 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 GTF2IP78347 998 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 TRIM28Q13263 835 aaKnown RBP6.55□□□□□ -1.36
LINC01649-201ENST00000438885 EML3Q32P44 896 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 CDCA8Q53HL2 280 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 TBCELQ5QJ74 424 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 TMC1Q8TDI8 760 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
LINC01649-201ENST00000438885 NAP1L5Q96NT1 182 aaPredicted RBP6.55□□□□□ -1.36
LINC01649-201ENST00000438885 FMNL2Q96PY5 1086 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 PRDM4Q9UKN5 801 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 KIAA1024Q9UPX6 916 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 PARP3Q9Y6F1 533 aa6.55□□□□□ -1.36
LINC01649-201ENST00000438885 PPRC1Q5VV67 1664 aaKnown RBP6.55□□□□□ -1.36
LINC01649-201ENST00000438885 KIF14Q15058 1648 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 GOLGA6L3A6NEY3 463 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 ARID3CA6NKF2 412 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 XRCC6P12956 609 aaKnown RBP eCLIP6.54□□□□□ -1.36
LINC01649-201ENST00000438885 ARSJQ5FYB0 599 aaPredicted RBP6.54□□□□□ -1.36
LINC01649-201ENST00000438885 MTERF4Q7Z6M4 381 aaKnown RBP6.54□□□□□ -1.36
LINC01649-201ENST00000438885 GAS2L2Q8NHY3 880 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 ANTXR1Q9H6X2 564 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 PRDM6Q9NQX0 595 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 MARK1Q9P0L2 795 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 HCN2Q9UL51 889 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 KDM5CP41229 1560 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 E9PCH4 1651 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 RALGAPBQ86X10 1494 aa6.54□□□□□ -1.36
LINC01649-201ENST00000438885 USP17L3A6NCW0 530 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 USP17L4A6NCW7 530 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 ZBTB7BO15156 539 aaPredicted RBP6.53□□□□□ -1.36
LINC01649-201ENST00000438885 EFSO43281 561 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 SMTNP53814 917 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 PCBP4P57723 403 aaKnown RBP6.53□□□□□ -1.36
LINC01649-201ENST00000438885 FZD5Q13467 585 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 NBPF8Q3BBV2 869 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 USP17L2Q6R6M4 530 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 USP17L1Q7RTZ2 530 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 MPHOSPH9Q99550 1183 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 MDFIQ99750 246 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 POGKQ9P215 609 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 NOD1Q9Y239 953 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 GJA3Q9Y6H8 435 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 VIRMAQ69YN4 1812 aaKnown RBP6.53□□□□□ -1.36
LINC01649-201ENST00000438885 ARHGEF12Q9NZN5 1544 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 MTUS2Q5JR59 1369 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 PARD3Q8TEW0 1356 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 ATP10BO94823 1461 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 GLI2P10070 1586 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 A6NJR5 290 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 CLDN10P78369 228 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 AAMPQ13685 434 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 NLRP13Q86W25 1043 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 SMAP1Q8IYB5 467 aaPredicted RBP6.53□□□□□ -1.36
LINC01649-201ENST00000438885 ZNF295-AS1Q8N0V1 137 aa6.53□□□□□ -1.36
LINC01649-201ENST00000438885 MKRN1Q9UHC7 482 aaKnown RBP6.53□□□□□ -1.36
LINC01649-201ENST00000438885 USP47Q96K76 1375 aa6.52□□□□□ -1.36
LINC01649-201ENST00000438885 BCORL1Q5H9F3 1711 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 USP19O94966 1318 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 FHOD3Q2V2M9 1422 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 EPRSP07814 1512 aaKnown RBP6.52□□□□□ -1.37
LINC01649-201ENST00000438885 ARID1BQ8NFD5 2236 aaPredicted RBP6.52□□□□□ -1.37
LINC01649-201ENST00000438885 RAPGEF6Q8TEU7 1601 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 MAP3K4Q9Y6R4 1608 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 ADARB2-AS1A8MUL3 147 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 C9orf172C9J069 976 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 ATP9BO43861 1147 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 SIN3BO75182 1162 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 PTMSP20962 102 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 RFX1P22670 979 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 GRIK4Q16099 956 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 TNS4Q8IZW8 715 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
LINC01649-201ENST00000438885 ZIC5Q96T25 663 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
LINC01649-201ENST00000438885 MAPK8IP3Q9UPT6 1336 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 PALM3A6NDB9 673 aaPredicted RBP6.51□□□□□ -1.37
LINC01649-201ENST00000438885 CDK2AP1O14519 115 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 MTFR1Q15390 333 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 UTP14CQ5TAP6 766 aaKnown RBP6.51□□□□□ -1.37
LINC01649-201ENST00000438885 CRBNQ96SW2 442 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 ZNF358Q9NW07 568 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 NINLQ9Y2I6 1382 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 NLRP1Q9C000 1473 aa6.51□□□□□ -1.37
LINC01649-201ENST00000438885 NUP153P49790 1475 aaKnown RBP6.5□□□□□ -1.37
LINC01649-201ENST00000438885 WDR7Q9Y4E6 1490 aa6.5□□□□□ -1.37
LINC01649-201ENST00000438885 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms