RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 PAK2Q13177 524 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 ITPKCQ96DU7 683 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.77□□□□□ -1.01
SPEN-202ENST00000438066 FAM8A1Q9UBU6 413 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 TTC37Q6PGP7 1564 aa8.77□□□□□ -1.01
SPEN-202ENST00000438066 KDM5BQ9UGL1 1544 aa8.76□□□□□ -1.01
SPEN-202ENST00000438066 TGFBR3LH3BV60 316 aa8.76□□□□□ -1.01
SPEN-202ENST00000438066 Q6ZVU0 165 aa8.76□□□□□ -1.01
SPEN-202ENST00000438066 ZNF438Q7Z4V0 828 aa8.76□□□□□ -1.01
SPEN-202ENST00000438066 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
SPEN-202ENST00000438066 ADGRL2O95490 1459 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 MYO5CQ9NQX4 1742 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 PLEKHD1A6NEE1 506 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 GIPC1O14908 333 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 ATF4P18848 351 aaPredicted RBP8.75□□□□□ -1.01
SPEN-202ENST00000438066 GJA8P48165 433 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 IDH3AP50213 366 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 BMS1Q14692 1282 aaKnown RBP8.75□□□□□ -1.01
SPEN-202ENST00000438066 SOGA3Q5TF21 947 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 SDE2Q6IQ49 451 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 NXPE4Q6UWF7 544 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 ZNF280CQ8ND82 737 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 SNX29Q8TEQ0 813 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 OSBPL2Q9H1P3 480 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 NPHS2Q9NP85 383 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.75□□□□□ -1.01
SPEN-202ENST00000438066 ZNF644Q9H582 1327 aaPredicted RBP8.75□□□□□ -1.01
SPEN-202ENST00000438066 ARHGEF5Q12774 1597 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 SHANK2Q9UPX8 1470 aa8.75□□□□□ -1.01
SPEN-202ENST00000438066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPEN-202ENST00000438066 ITGBL1O95965 494 aaPredicted RBP8.74□□□□□ -1.01
SPEN-202ENST00000438066 HSH2DQ96JZ2 352 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 SUSD3Q96L08 255 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 TBX22Q9Y458 520 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 WASF2Q9Y6W5 498 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 SAMD9LQ8IVG5 1584 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
SPEN-202ENST00000438066 POLR3DP05423 398 aaPredicted RBP8.74□□□□□ -1.01
SPEN-202ENST00000438066 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
SPEN-202ENST00000438066 GNASQ5JWF2 1037 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 SLC27A3Q5K4L6 730 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 CMTR1Q8N1G2 835 aaKnown RBP8.74□□□□□ -1.01
SPEN-202ENST00000438066 EMID1Q96A84 441 aaPredicted RBP8.74□□□□□ -1.01
SPEN-202ENST00000438066 GPRASP2Q96D09 838 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 ZFYVE28Q9HCC9 887 aa8.74□□□□□ -1.01
SPEN-202ENST00000438066 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
SPEN-202ENST00000438066 PHACTR2O75167 634 aa8.73□□□□□ -1.01
SPEN-202ENST00000438066 ST13P50502 369 aaKnown RBP8.73□□□□□ -1.01
SPEN-202ENST00000438066 HIF1AQ16665 826 aa8.73□□□□□ -1.01
SPEN-202ENST00000438066 C4orf17Q53FE4 359 aa8.73□□□□□ -1.01
SPEN-202ENST00000438066 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
SPEN-202ENST00000438066 NEUROD4Q9HD90 331 aa8.73□□□□□ -1.01
SPEN-202ENST00000438066 CFDP1Q9UEE9 299 aaPredicted RBP8.73□□□□□ -1.01
SPEN-202ENST00000438066 DMGDHQ9UI17 866 aaKnown RBP8.73□□□□□ -1.01
SPEN-202ENST00000438066 FNDC3AQ9Y2H6 1198 aaKnown RBP8.73□□□□□ -1.01
SPEN-202ENST00000438066 DENND4BO75064 1496 aaPredicted RBP8.73□□□□□ -1.01
SPEN-202ENST00000438066 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
SPEN-202ENST00000438066 NBPF1Q3BBV0 1214 aa8.72□□□□□ -1.01
SPEN-202ENST00000438066 ERMP1Q7Z2K6 904 aa8.72□□□□□ -1.01
SPEN-202ENST00000438066 NLGN1Q8N2Q7 840 aa8.72□□□□□ -1.01
SPEN-202ENST00000438066 BCO2Q9BYV7 579 aa8.72□□□□□ -1.01
SPEN-202ENST00000438066 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
SPEN-202ENST00000438066 GADD45BO75293 160 aaPredicted RBP8.71□□□□□ -1.01
SPEN-202ENST00000438066 PHKA2P46019 1235 aa8.71□□□□□ -1.01
SPEN-202ENST00000438066 PDE12Q6L8Q7 609 aaKnown RBP8.71□□□□□ -1.01
SPEN-202ENST00000438066 XKR5Q6UX68 686 aa8.71□□□□□ -1.01
SPEN-202ENST00000438066 ELP3Q9H9T3 547 aa8.71□□□□□ -1.01
SPEN-202ENST00000438066 KBTBD4Q9NVX7 518 aa8.71□□□□□ -1.01
SPEN-202ENST00000438066 RTCBQ9Y3I0 505 aaKnown RBP8.71□□□□□ -1.01
SPEN-202ENST00000438066 NCOA1Q15788 1441 aa8.71□□□□□ -1.02
SPEN-202ENST00000438066 ARSDP51689 593 aa8.71□□□□□ -1.02
SPEN-202ENST00000438066 EGFLAMQ63HQ2 1017 aa8.71□□□□□ -1.02
SPEN-202ENST00000438066 RRP7BPQ9NSQ0 103 aa8.71□□□□□ -1.02
SPEN-202ENST00000438066 MBD5Q9P267 1494 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 INPP5BP32019 993 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
SPEN-202ENST00000438066 IER5Q5VY09 327 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 BICDL1Q6ZP65 573 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
SPEN-202ENST00000438066 GRIP2Q9C0E4 1043 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 KCNMB2Q9Y691 235 aa8.7□□□□□ -1.02
SPEN-202ENST00000438066 F6X3S4 739 aa8.69□□□□□ -1.02
SPEN-202ENST00000438066 ZNF746Q6NUN9 644 aaPredicted RBP8.69□□□□□ -1.02
SPEN-202ENST00000438066 JAZF1Q86VZ6 243 aa8.69□□□□□ -1.02
SPEN-202ENST00000438066 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
SPEN-202ENST00000438066 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
SPEN-202ENST00000438066 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
SPEN-202ENST00000438066 BTLAQ7Z6A9 289 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 SPON2Q9BUD6 331 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 ZDHHC3Q9NYG2 299 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 C9orf84Q5VXU9 1444 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 ARHGAP5Q13017 1502 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 ARAP3Q8WWN8 1544 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 SYCP2Q9BX26 1530 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 EREGO14944 169 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 SLC19A1P41440 591 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 CKAP2LQ8IYA6 745 aa8.68□□□□□ -1.02
SPEN-202ENST00000438066 TTF2Q9UNY4 1162 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms