RNA–Protein interactions for RNA: ENST00000435643.1

AC007879.1-201, humanhuman

TSL 4 BASIC

Gene AC007879.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.1-201ENST00000435643 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
AC007879.1-201ENST00000435643 TSPYL4Q9UJ04 414 aa10.45□□□□□ -0.74
AC007879.1-201ENST00000435643 C5P01031 1676 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 HEG1Q9ULI3 1381 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 IL16Q14005 1332 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 KDM4AO75164 1064 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 LINC00116Q8NCU8 138 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 FMNL2Q96PY5 1086 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 MBIPQ9NS73 344 aa10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 MYH14Q7Z406 1995 aaKnown RBP10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 CICQ96RK0 1608 aaPredicted RBP10.44□□□□□ -0.74
AC007879.1-201ENST00000435643 PRAMEF22A3QJZ6 481 aa10.43□□□□□ -0.74
AC007879.1-201ENST00000435643 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
AC007879.1-201ENST00000435643 USP16Q9Y5T5 823 aa10.43□□□□□ -0.74
AC007879.1-201ENST00000435643 J3QL48 77 aa10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 SNRPA1P09661 255 aaKnown RBP10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 CYP19A1P11511 503 aaPredicted RBP10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 ZNF827Q17R98 1081 aa10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 KRT24Q2M2I5 525 aa10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 REPIN1Q9BWE0 567 aaKnown RBP10.42□□□□□ -0.74
AC007879.1-201ENST00000435643 C4BP0C0L5 1744 aa10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 USP46P62068 366 aa10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 RC3H1Q5TC82 1133 aaKnown RBP10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 NBPF14Q5TI25 921 aa10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 INTS5Q6P9B9 1019 aaKnown RBP10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 TUBGCP6Q96RT7 1819 aa10.41□□□□□ -0.74
AC007879.1-201ENST00000435643 SLC15A2Q16348 729 aa10.4□□□□□ -0.74
AC007879.1-201ENST00000435643 SMIM5Q71RC9 77 aa10.4□□□□□ -0.74
AC007879.1-201ENST00000435643 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
AC007879.1-201ENST00000435643 HLA-CQ95604 372 aa10.4□□□□□ -0.74
AC007879.1-201ENST00000435643 TEX13AQ9BXU3 409 aaPredicted RBP10.4□□□□□ -0.74
AC007879.1-201ENST00000435643 STK32BQ9NY57 414 aa10.4□□□□□ -0.74
AC007879.1-201ENST00000435643 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.75
AC007879.1-201ENST00000435643 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 CNTNAP4Q9C0A0 1308 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 FANCIQ9NVI1 1328 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 ELL2O00472 640 aaPredicted RBP10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 HOXA2O43364 376 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 WIPF1O43516 503 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 A1BGP04217 495 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 CRKLP46109 303 aaKnown RBP10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 DUSP27Q5VZP5 1158 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 TRMT2AQ8IZ69 625 aaKnown RBP10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 TSPYL6Q8N831 410 aa10.39□□□□□ -0.75
AC007879.1-201ENST00000435643 QSER1Q2KHR3 1735 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 E9PSI1 815 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 IRF6O14896 467 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 RPS6KA4O75676 772 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 STARD3NLO95772 234 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 HMGB2P26583 209 aaKnown RBP10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 SKOR1P84550 965 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 MDM2Q00987 491 aaPredicted RBP10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 R3HDM1Q15032 1099 aaKnown RBP10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 TRIM47Q96LD4 638 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 AK7Q96M32 723 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 MYH16Q9H6N6 1097 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 CCDC87Q9NVE4 849 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 ZBTB1Q9Y2K1 713 aa10.38□□□□□ -0.75
AC007879.1-201ENST00000435643 ZBED9Q6R2W3 1325 aa10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 SNRPBP14678 240 aaKnown RBP10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 EIF2S2P20042 333 aaKnown RBP10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 CANXP27824 592 aaKnown RBP10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 PIP4K2AP48426 406 aaPredicted RBP10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 WNT7BP56706 349 aa10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 HPS1Q92902 700 aa10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 PDGFDQ9GZP0 370 aaPredicted RBP10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 TFCP2L1Q9NZI6 479 aa10.37□□□□□ -0.75
AC007879.1-201ENST00000435643 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
AC007879.1-201ENST00000435643 VAMP4O75379 141 aa10.36□□□□□ -0.75
AC007879.1-201ENST00000435643 HOXB7P09629 217 aa10.36□□□□□ -0.75
AC007879.1-201ENST00000435643 COL23A1Q86Y22 540 aaPredicted RBP10.36□□□□□ -0.75
AC007879.1-201ENST00000435643 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
AC007879.1-201ENST00000435643 RTCBQ9Y3I0 505 aaKnown RBP10.36□□□□□ -0.75
AC007879.1-201ENST00000435643 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
AC007879.1-201ENST00000435643 EIF5P55010 431 aaKnown RBP10.35□□□□□ -0.75
AC007879.1-201ENST00000435643 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
AC007879.1-201ENST00000435643 CCDC24Q8N4L8 307 aa10.35□□□□□ -0.75
AC007879.1-201ENST00000435643 CASZ1Q86V15 1759 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 ANXA1P04083 346 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 JUNDP17535 347 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 SSFA2P28290 1259 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 IL6STP40189 918 aaPredicted RBP10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 PROSER3Q2NL68 480 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 TRAPPC3LQ5T215 181 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 LRP10Q7Z4F1 713 aa10.34□□□□□ -0.75
AC007879.1-201ENST00000435643 FLAD1Q8NFF5 587 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms