RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 NSFL1CQ9UNZ2 370 aaKnown RBP12.17□□□□□ -0.46
LDLRAD4-204ENST00000435606 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 PTPN14Q15678 1187 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 COPS6Q7L5N1 327 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 SYCE3A1L190 88 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 CALML3P27482 149 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 BBXQ8WY36 941 aaPredicted RBP12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 TRPM2O94759 1503 aa12.16□□□□□ -0.46
LDLRAD4-204ENST00000435606 GSDMDP57764 484 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 TTC16Q8NEE8 873 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 GJB2P29033 226 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 GNPATO15228 680 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 PRPHP41219 470 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 KSR2Q6VAB6 950 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 KIF18AQ8NI77 898 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 NOD1Q9Y239 953 aa12.15□□□□□ -0.46
LDLRAD4-204ENST00000435606 DNA2P51530 1060 aa12.15□□□□□ -0.47
LDLRAD4-204ENST00000435606 CNBD1Q8NA66 436 aa12.15□□□□□ -0.47
LDLRAD4-204ENST00000435606 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 GOLGA6L9A6NEM1 432 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 NEMFO60524 1076 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 UBE4AQ14139 1066 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 TMCO3Q6UWJ1 677 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 GTPBP4Q9BZE4 634 aaKnown RBP12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 PLCH2O75038 1416 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 TRIM27P14373 513 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 TNPO1Q92973 898 aaKnown RBP12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 CTAGE1Q96RT6 745 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 GPHNQ9NQX3 736 aaPredicted RBP12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 SPECC1Q5M775 1068 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
LDLRAD4-204ENST00000435606 POTEB2H3BUK9 544 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 MCM4P33991 863 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 MAST3O60307 1309 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 IRS4O14654 1257 aaPredicted RBP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 FAM13AO94988 1023 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 MCM9Q9NXL9 1143 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 CAVIN2O95810 425 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 GNA11P29992 359 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 HLTFQ14527 1009 aaKnown RBP eCLIP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 RFX1P22670 979 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 BCCIPQ9P287 314 aaKnown RBP eCLIP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 PDE6BP35913 854 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 PPP1R14CQ8TAE6 165 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 NCKAP5LQ9HCH0 1330 aa12.13□□□□□ -0.47
LDLRAD4-204ENST00000435606 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 ALG1Q9BT22 464 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 OTUD6BQ8N6M0 293 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 FLT4P35916 1363 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 H0YIN7 160 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 MPNDQ8N594 471 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 CEP63Q96MT8 703 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 UHRF1BP1Q6BDS2 1440 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 BTG4Q9NY30 223 aa12.12□□□□□ -0.47
LDLRAD4-204ENST00000435606 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 BACH1O14867 736 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 KCNG4Q8TDN1 519 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 ABCC1P33527 1531 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 SYKP43405 635 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 MAGEB6Q8N7X4 407 aa12.11□□□□□ -0.47
LDLRAD4-204ENST00000435606 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms