RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 SEC62Q99442 399 aaKnown RBP19.93■□□□□ 0.78
LIMK1-203ENST00000435201 ABCC12Q96J65 1359 aa19.93■□□□□ 0.78
LIMK1-203ENST00000435201 ERVV-1B6SEH8 477 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 IL6STP40189 918 aaPredicted RBP19.92■□□□□ 0.78
LIMK1-203ENST00000435201 ST3GAL1Q11201 340 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 HLFQ16534 295 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
LIMK1-203ENST00000435201 NEK1Q96PY6 1258 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 DSCC1Q9BVC3 393 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 ZBTB1Q9Y2K1 713 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 PHLPP1O60346 1717 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 RBM27Q9P2N5 1060 aaKnown RBP19.92■□□□□ 0.78
LIMK1-203ENST00000435201 TAF6LQ9Y6J9 622 aa19.92■□□□□ 0.78
LIMK1-203ENST00000435201 KAT6BQ8WYB5 2073 aa19.91■□□□□ 0.78
LIMK1-203ENST00000435201 RNF113AO15541 343 aaKnown RBP19.91■□□□□ 0.78
LIMK1-203ENST00000435201 NASPP49321 788 aaPredicted RBP19.91■□□□□ 0.78
LIMK1-203ENST00000435201 TOB2Q14106 344 aaPredicted RBP19.91■□□□□ 0.78
LIMK1-203ENST00000435201 TTC39AQ5SRH9 613 aa19.91■□□□□ 0.78
LIMK1-203ENST00000435201 TMEM63CQ9P1W3 806 aa19.91■□□□□ 0.78
LIMK1-203ENST00000435201 GORABQ5T7V8 394 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 NSFL1CQ9UNZ2 370 aaKnown RBP19.9■□□□□ 0.78
LIMK1-203ENST00000435201 MTMR6Q9Y217 621 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 TCHHQ07283 1943 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 LTBP4Q8N2S1 1624 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 SPATA31A1Q5TZJ5 1347 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 CYP21A2P08686 494 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 HMGB1P09429 215 aaKnown RBP19.9■□□□□ 0.78
LIMK1-203ENST00000435201 PDCP20941 246 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 GPTP24298 496 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
LIMK1-203ENST00000435201 CSPP1Q1MSJ5 1256 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 USP48Q86UV5 1035 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 NECAB1Q8N987 351 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 ANP32BQ92688 251 aaKnown RBP19.9■□□□□ 0.78
LIMK1-203ENST00000435201 XAGE2Q96GT9 111 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 RIC1Q4ADV7 1423 aa19.9■□□□□ 0.78
LIMK1-203ENST00000435201 CHGBP05060 677 aa19.89■□□□□ 0.77
LIMK1-203ENST00000435201 CTSWP56202 376 aa19.89■□□□□ 0.77
LIMK1-203ENST00000435201 LRSAM1Q6UWE0 723 aa19.89■□□□□ 0.77
LIMK1-203ENST00000435201 TTLL11Q8NHH1 800 aa19.89■□□□□ 0.77
LIMK1-203ENST00000435201 CICQ96RK0 1608 aaPredicted RBP19.89■□□□□ 0.77
LIMK1-203ENST00000435201 ANKRD18BA2A2Z9 1011 aa19.88■□□□□ 0.77
LIMK1-203ENST00000435201 ZFYP08048 801 aaPredicted RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 DDB1Q16531 1140 aa19.88■□□□□ 0.77
LIMK1-203ENST00000435201 FOXD4L6Q3SYB3 417 aaPredicted RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 FOXD4L3Q6VB84 417 aaPredicted RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 DZIP3Q86Y13 1208 aaKnown RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 LAMA4Q16363 1823 aa19.88■□□□□ 0.77
LIMK1-203ENST00000435201 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
LIMK1-203ENST00000435201 COL9A3Q14050 684 aaPredicted RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 TCEANC2Q96MN5 208 aa19.88■□□□□ 0.77
LIMK1-203ENST00000435201 CCDC85AQ96PX6 553 aaPredicted RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 TRMT112Q9UI30 125 aaKnown RBP19.88■□□□□ 0.77
LIMK1-203ENST00000435201 NWD2Q9ULI1 1742 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 MAST3O60307 1309 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 IRS4O14654 1257 aaPredicted RBP19.87■□□□□ 0.77
LIMK1-203ENST00000435201 PHF14O94880 888 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 ITGA6P23229 1130 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 CNPY2Q9Y2B0 182 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 RIPOR2Q9Y4F9 1068 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 RREB1Q92766 1687 aa19.87■□□□□ 0.77
LIMK1-203ENST00000435201 PDE8AO60658 829 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 ADORA1P30542 326 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 METTL24Q5JXM2 366 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 AK7Q96M32 723 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 GREM2Q9H772 168 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 GDPD2Q9HCC8 539 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 MYH7P12883 1935 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 SYCE3A1L190 88 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
LIMK1-203ENST00000435201 ATP2B3Q16720 1220 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 LARP1BQ659C4 914 aaKnown RBP19.86■□□□□ 0.77
LIMK1-203ENST00000435201 LDHAL6AQ6ZMR3 332 aa19.86■□□□□ 0.77
LIMK1-203ENST00000435201 LRP5O75197 1615 aa19.85■□□□□ 0.77
LIMK1-203ENST00000435201 VPS37CA5D8V6 355 aaPredicted RBP19.85■□□□□ 0.77
LIMK1-203ENST00000435201 GADD45BO75293 160 aaPredicted RBP19.85■□□□□ 0.77
LIMK1-203ENST00000435201 HSPD1P10809 573 aaKnown RBP19.85■□□□□ 0.77
LIMK1-203ENST00000435201 UBE2HP62256 183 aa19.85■□□□□ 0.77
LIMK1-203ENST00000435201 Q6ZUG5 572 aa19.85■□□□□ 0.77
LIMK1-203ENST00000435201 ZNF34Q8IZ26 560 aa19.85■□□□□ 0.77
LIMK1-203ENST00000435201 SYNE4Q8N205 404 aa19.85■□□□□ 0.77
LIMK1-203ENST00000435201 GTF3C6Q969F1 213 aa19.85■□□□□ 0.77
LIMK1-203ENST00000435201 ADAMTS2O95450 1211 aa19.84■□□□□ 0.77
LIMK1-203ENST00000435201 ZNF512BQ96KM6 892 aaPredicted RBP19.84■□□□□ 0.77
LIMK1-203ENST00000435201 CNNM1Q9NRU3 951 aa19.84■□□□□ 0.77
LIMK1-203ENST00000435201 EIF5P55010 431 aaKnown RBP19.84■□□□□ 0.77
LIMK1-203ENST00000435201 DHX32Q7L7V1 743 aaKnown RBP19.84■□□□□ 0.77
LIMK1-203ENST00000435201 PPP1R9BQ96SB3 815 aa19.84■□□□□ 0.77
LIMK1-203ENST00000435201 CCDC87Q9NVE4 849 aa19.84■□□□□ 0.77
LIMK1-203ENST00000435201 TBC1D2BQ9UPU7 963 aa19.84■□□□□ 0.77
LIMK1-203ENST00000435201 M0R2C6 588 aa19.83■□□□□ 0.76
LIMK1-203ENST00000435201 STOX1Q6ZVD7 989 aa19.83■□□□□ 0.76
LIMK1-203ENST00000435201 TRIM44Q96DX7 344 aaPredicted RBP19.83■□□□□ 0.76
LIMK1-203ENST00000435201 RBSNQ9H1K0 784 aa19.83■□□□□ 0.76
LIMK1-203ENST00000435201 UBN2Q6ZU65 1347 aa19.83■□□□□ 0.76
LIMK1-203ENST00000435201 HSP90B1P14625 803 aaKnown RBP19.82■□□□□ 0.76
LIMK1-203ENST00000435201 SLFNL1Q499Z3 407 aa19.82■□□□□ 0.76
LIMK1-203ENST00000435201 SPATA31A5Q5VU36 1347 aa19.82■□□□□ 0.76
LIMK1-203ENST00000435201 SPATA31A7Q8IWB4 1347 aa19.82■□□□□ 0.76
LIMK1-203ENST00000435201 FIBPO43427 364 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms