RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 BRMS1Q9HCU9 246 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 CHL1O00533 1208 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 TTC21BQ7Z4L5 1316 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 PLCH2O75038 1416 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 SERPINC1P01008 464 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 LIG3P49916 1009 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 FLIIQ13045 1269 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 DHX8Q14562 1220 aaKnown RBP8.64□□□□□ -1.03
CPSF6-202ENST00000435070 OSBPL5Q9H0X9 879 aaPredicted RBP8.64□□□□□ -1.03
CPSF6-202ENST00000435070 RHOXF2BP0C7M4 288 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 GPR161Q8N6U8 529 aaKnown RBP8.64□□□□□ -1.03
CPSF6-202ENST00000435070 USP28Q96RU2 1077 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 RHOXF2Q9BQY4 288 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 DESI2Q9BSY9 194 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 CXorf56Q9H5V9 222 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 BICC1Q9H694 974 aaKnown RBP8.64□□□□□ -1.03
CPSF6-202ENST00000435070 CFAP45Q9UL16 551 aa8.64□□□□□ -1.03
CPSF6-202ENST00000435070 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
CPSF6-202ENST00000435070 SF3A1Q15459 793 aaKnown RBP8.63□□□□□ -1.03
CPSF6-202ENST00000435070 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 PPM1EQ8WY54 764 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 DHX58Q96C10 678 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
CPSF6-202ENST00000435070 UBXN6Q9BZV1 441 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 TPM1P09493 284 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 MMP14P50281 582 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 APOBRQ0VD83 1088 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 PNPLA6Q8IY17 1366 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 HSP90B2PQ58FF3 399 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 CCDC12Q8WUD4 166 aaPredicted RBP8.63□□□□□ -1.03
CPSF6-202ENST00000435070 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 DPF2Q92785 391 aa8.63□□□□□ -1.03
CPSF6-202ENST00000435070 SOS1Q07889 1333 aaPredicted RBP8.62□□□□□ -1.03
CPSF6-202ENST00000435070 RESTQ13127 1097 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 CNNM3Q8NE01 707 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 CTAGE5O15320 804 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 CCDC172P0C7W6 258 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
CPSF6-202ENST00000435070 FANCCQ00597 558 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 USP44Q9H0E7 712 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 AKAP2Q9Y2D5 859 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 CEP83Q9Y592 693 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 PHLPP2Q6ZVD8 1323 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 ATP8B1O43520 1251 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 CCT2P78371 535 aaKnown RBP8.62□□□□□ -1.03
CPSF6-202ENST00000435070 CCDC91Q7Z6B0 441 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 GOLGA1Q92805 767 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 GDAP1L1Q96MZ0 367 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 IMPACTQ9P2X3 320 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 SLC27A2O14975 620 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 MAP2K2P36507 400 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 UBASH3AP57075 661 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 ANKRD20A12PQ8NF67 263 aa8.62□□□□□ -1.03
CPSF6-202ENST00000435070 SEC62Q99442 399 aaKnown RBP8.62□□□□□ -1.03
CPSF6-202ENST00000435070 PLEKHO1Q53GL0 409 aaPredicted RBP8.61□□□□□ -1.03
CPSF6-202ENST00000435070 RRP12Q5JTH9 1297 aaKnown RBP8.61□□□□□ -1.03
CPSF6-202ENST00000435070 TULP4Q9NRJ4 1543 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 PREX2Q70Z35 1606 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 TMEM232C9JQI7 657 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 NECTIN1Q15223 517 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 IL17RAQ96F46 866 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 LZTFL1Q9NQ48 299 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 PSMA5P28066 241 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 NCKAP5LQ9HCH0 1330 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 NMIQ13287 307 aaPredicted RBP8.61□□□□□ -1.03
CPSF6-202ENST00000435070 FBXW10Q5XX13 1052 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 MCTP2Q6DN12 878 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 LRRC31Q6UY01 552 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 PPP2R2CQ9Y2T4 447 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 YEATS2Q9ULM3 1422 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 QRICH2Q9H0J4 1663 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 TOP1P11387 765 aaKnown RBP8.61□□□□□ -1.03
CPSF6-202ENST00000435070 CORO7P57737 925 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 FAM160A1Q05DH4 1040 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 OTUD7BQ6GQQ9 843 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 ABCB6Q9NP58 842 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 FBXO3Q9UK99 471 aa8.61□□□□□ -1.03
CPSF6-202ENST00000435070 VWA3AA6NCI4 1184 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 WDHD1O75717 1129 aaPredicted RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 GLRX3O76003 335 aaKnown RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 EIF2S2P20042 333 aaKnown RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 TOB2Q14106 344 aaPredicted RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 PA2G4Q9UQ80 394 aaKnown RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 ADKP55263 362 aaKnown RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 MMS22LQ6ZRQ5 1243 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 BOLA2Q9H3K6 86 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 TTC41PQ6P2S7 1318 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 TM6SF1Q9BZW5 370 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 CCDC8Q9H0W5 538 aaPredicted RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 FAM204AQ9H8W3 233 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 SUFUQ9UMX1 484 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 NDUFA8P51970 172 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 CNPY4Q8N129 248 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 ZNF526Q8TF50 670 aaPredicted RBP8.6□□□□□ -1.03
CPSF6-202ENST00000435070 RABGGTAQ92696 567 aa8.6□□□□□ -1.03
CPSF6-202ENST00000435070 PSD3Q9NYI0 1048 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms