RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 PSMD14O00487 310 aa17.02■□□□□ 0.32
EDEM1-202ENST00000434243 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.329e-8■□□□□ 11.3
EDEM1-202ENST00000434243 UBE3BQ7Z3V4 1068 aa17.02■□□□□ 0.32
EDEM1-202ENST00000434243 MICALL2Q8IY33 904 aa17.02■□□□□ 0.32
EDEM1-202ENST00000434243 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
EDEM1-202ENST00000434243 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
EDEM1-202ENST00000434243 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
EDEM1-202ENST00000434243 TRAF5O00463 557 aa17.01■□□□□ 0.31
EDEM1-202ENST00000434243 VEGFBP49765 207 aa17.01■□□□□ 0.31
EDEM1-202ENST00000434243 DEFB115Q30KQ5 88 aa17.01■□□□□ 0.31
EDEM1-202ENST00000434243 PAXIP1Q6ZW49 1069 aaPredicted RBP17.01■□□□□ 0.31
EDEM1-202ENST00000434243 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
EDEM1-202ENST00000434243 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
EDEM1-202ENST00000434243 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
EDEM1-202ENST00000434243 SHTN1A0MZ66 631 aa17■□□□□ 0.31
EDEM1-202ENST00000434243 COL13A1Q5TAT6 717 aaPredicted RBP17■□□□□ 0.31
EDEM1-202ENST00000434243 GREM2Q9H772 168 aa17■□□□□ 0.31
EDEM1-202ENST00000434243 KCNQ5Q9NR82 932 aa17■□□□□ 0.31
EDEM1-202ENST00000434243 DUOX1Q9NRD9 1551 aa17■□□□□ 0.31
EDEM1-202ENST00000434243 COL4A1P02462 1669 aa17■□□□□ 0.31
EDEM1-202ENST00000434243 ADAMTSL1Q8N6G6 1762 aa17■□□□□ 0.31
EDEM1-202ENST00000434243 H7C1W4 665 aa16.99■□□□□ 0.31
EDEM1-202ENST00000434243 GCKRQ14397 625 aa16.99■□□□□ 0.31
EDEM1-202ENST00000434243 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
EDEM1-202ENST00000434243 TRPM4Q8TD43 1214 aa16.99■□□□□ 0.31
EDEM1-202ENST00000434243 XDHP47989 1333 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 ATP2B4P23634 1241 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 IGHMBP2P38935 993 aaKnown RBP16.98■□□□□ 0.31
EDEM1-202ENST00000434243 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
EDEM1-202ENST00000434243 GRM1Q13255 1194 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 SAMD7Q7Z3H4 446 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 DPF2Q92785 391 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 GLIS2Q9BZE0 524 aaPredicted RBP16.98■□□□□ 0.31
EDEM1-202ENST00000434243 ZNF408Q9H9D4 720 aa16.98■□□□□ 0.31
EDEM1-202ENST00000434243 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
EDEM1-202ENST00000434243 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
EDEM1-202ENST00000434243 F6X3S4 739 aa16.97■□□□□ 0.31
EDEM1-202ENST00000434243 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
EDEM1-202ENST00000434243 ZC3H15Q8WU90 426 aaKnown RBP16.97■□□□□ 0.31
EDEM1-202ENST00000434243 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
EDEM1-202ENST00000434243 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
EDEM1-202ENST00000434243 CELF2O95319 508 aaKnown RBP16.96■□□□□ 0.31
EDEM1-202ENST00000434243 RPS12P25398 132 aaKnown RBP16.96■□□□□ 0.31
EDEM1-202ENST00000434243 CST9Q5W186 159 aa16.96■□□□□ 0.31
EDEM1-202ENST00000434243 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
EDEM1-202ENST00000434243 MPHOSPH8Q99549 860 aa16.96■□□□□ 0.31
EDEM1-202ENST00000434243 MINPP1Q9UNW1 487 aa16.96■□□□□ 0.31
EDEM1-202ENST00000434243 RTL9Q8NET4 1388 aa16.96■□□□□ 0.31
EDEM1-202ENST00000434243 WDR33Q9C0J8 1336 aaKnown RBP16.96■□□□□ 0.3
EDEM1-202ENST00000434243 ITGA6P23229 1130 aa16.95■□□□□ 0.3
EDEM1-202ENST00000434243 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
EDEM1-202ENST00000434243 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
EDEM1-202ENST00000434243 VIL1P09327 827 aaKnown RBP16.94■□□□□ 0.3
EDEM1-202ENST00000434243 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
EDEM1-202ENST00000434243 TNS4Q8IZW8 715 aa16.94■□□□□ 0.3
EDEM1-202ENST00000434243 PLA2G12BQ9BX93 195 aa16.94■□□□□ 0.3
EDEM1-202ENST00000434243 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
EDEM1-202ENST00000434243 WTIPA6NIX2 430 aaPredicted RBP16.93■□□□□ 0.3
EDEM1-202ENST00000434243 EGFRP00533 1210 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 ECE1P42892 770 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
EDEM1-202ENST00000434243 CASP7P55210 303 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 KIF4BQ2VIQ3 1234 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 DCPSQ96C86 337 aaKnown RBP16.93■□□□□ 0.3
EDEM1-202ENST00000434243 CAPNS2Q96L46 248 aa16.93■□□□□ 0.3
EDEM1-202ENST00000434243 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
EDEM1-202ENST00000434243 FOXN1O15353 648 aa16.92■□□□□ 0.3
EDEM1-202ENST00000434243 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
EDEM1-202ENST00000434243 CYP4F22Q6NT55 531 aa16.92■□□□□ 0.3
EDEM1-202ENST00000434243 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
EDEM1-202ENST00000434243 PODNQ7Z5L7 613 aa16.92■□□□□ 0.3
EDEM1-202ENST00000434243 TLL2Q9Y6L7 1015 aa16.92■□□□□ 0.3
EDEM1-202ENST00000434243 USP17L3A6NCW0 530 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 USP17L4A6NCW7 530 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 CSF1RP07333 972 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 KCNJ4P48050 445 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 USP17L1Q7RTZ2 530 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 KRT26Q7Z3Y9 468 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 AGBL3Q8NEM8 1001 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 ANKRD2Q9GZV1 360 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 LEMD3Q9Y2U8 911 aa16.91■□□□□ 0.3
EDEM1-202ENST00000434243 MAP2K1Q02750 393 aaPredicted RBP16.9■□□□□ 0.3
EDEM1-202ENST00000434243 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
EDEM1-202ENST00000434243 DLK2Q6UY11 383 aa16.9■□□□□ 0.3
EDEM1-202ENST00000434243 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
EDEM1-202ENST00000434243 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
EDEM1-202ENST00000434243 MED23Q9ULK4 1368 aa16.89■□□□□ 0.3
EDEM1-202ENST00000434243 CAPN15O75808 1086 aa16.89■□□□□ 0.29
EDEM1-202ENST00000434243 CTCFP49711 727 aaPredicted RBP16.89■□□□□ 0.29
EDEM1-202ENST00000434243 TAF7LQ5H9L4 462 aa16.89■□□□□ 0.29
EDEM1-202ENST00000434243 SAPCD2Q86UD0 394 aa16.89■□□□□ 0.29
EDEM1-202ENST00000434243 BEGAINQ9BUH8 593 aa16.89■□□□□ 0.29
EDEM1-202ENST00000434243 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
EDEM1-202ENST00000434243 ZNF804BA4D1E1 1349 aa16.89■□□□□ 0.29
EDEM1-202ENST00000434243 ADM5C9JUS6 153 aa16.88■□□□□ 0.29
EDEM1-202ENST00000434243 GRM8O00222 908 aa16.88■□□□□ 0.29
EDEM1-202ENST00000434243 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms