RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 PLAURQ03405 335 aa9.7□□□□□ -0.86
HDAC9-213ENST00000433709 OR13H1Q8NG92 308 aa9.7□□□□□ -0.86
HDAC9-213ENST00000433709 TMC1Q8TDI8 760 aa9.7□□□□□ -0.86
HDAC9-213ENST00000433709 NSUN5Q96P11 429 aaKnown RBP9.7□□□□□ -0.86
HDAC9-213ENST00000433709 NAGPAQ9UK23 515 aa9.7□□□□□ -0.86
HDAC9-213ENST00000433709 J3QW42 95 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 TNFRSF21O75509 655 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 HOXB4P17483 251 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-213ENST00000433709 NRLP54845 237 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 GPLD1P80108 840 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 EHHADHQ08426 723 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-213ENST00000433709 C1orf127Q8N9H9 656 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 RRAGCQ9HB90 399 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-213ENST00000433709 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
HDAC9-213ENST00000433709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-213ENST00000433709 CPB1P15086 417 aa9.68□□□□□ -0.86
HDAC9-213ENST00000433709 MAPK1P28482 360 aa9.68□□□□□ -0.86
HDAC9-213ENST00000433709 SNRPNP63162 240 aaKnown RBP9.68□□□□□ -0.86
HDAC9-213ENST00000433709 SND1Q7KZF4 910 aaKnown RBP eCLIP9.68□□□□□ -0.86
HDAC9-213ENST00000433709 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
HDAC9-213ENST00000433709 CITED4Q96RK1 184 aa9.68□□□□□ -0.86
HDAC9-213ENST00000433709 FAM129BQ96TA1 746 aa9.68□□□□□ -0.86
HDAC9-213ENST00000433709 RBCK1Q9BYM8 510 aa9.68□□□□□ -0.86
HDAC9-213ENST00000433709 LOC102724428A0A0B4J2F2 783 aa9.67□□□□□ -0.86
HDAC9-213ENST00000433709 IGHA2P01877 340 aa9.67□□□□□ -0.86
HDAC9-213ENST00000433709 SOX18P35713 384 aa9.67□□□□□ -0.86
HDAC9-213ENST00000433709 SIK1P57059 783 aa9.67□□□□□ -0.86
HDAC9-213ENST00000433709 CHRDQ9H2X0 955 aa9.67□□□□□ -0.86
HDAC9-213ENST00000433709 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 ALBP02768 609 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 HOXD8P13378 290 aaPredicted RBP9.66□□□□□ -0.86
HDAC9-213ENST00000433709 MARSP56192 900 aaKnown RBP9.66□□□□□ -0.86
HDAC9-213ENST00000433709 PDE3BQ13370 1112 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 PCSK7Q16549 785 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 PERM1Q5SV97 790 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 C8orf86Q6ZUL3 223 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 KANSL3Q9P2N6 904 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 ABCC8Q09428 1581 aa9.66□□□□□ -0.86
HDAC9-213ENST00000433709 CNTNAP5Q8WYK1 1306 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 M0R082 166 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 GPR182O15218 404 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 CES1P23141 567 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 PSAPL1Q6NUJ1 521 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 C20orf204Q6ZNR8 217 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 MICALL1Q8N3F8 863 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 ZNF417Q8TAU3 575 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 NUDT8Q8WV74 236 aa9.65□□□□□ -0.86
HDAC9-213ENST00000433709 ZNF587Q96SQ5 575 aaPredicted RBP9.65□□□□□ -0.86
HDAC9-213ENST00000433709 CCDC88BA6NC98 1476 aa9.65□□□□□ -0.87
HDAC9-213ENST00000433709 PHF20L1A8MW92 1017 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 EREGO14944 169 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 PHACTR2O75167 634 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 EIF2AK2P19525 551 aaKnown RBP9.64□□□□□ -0.87
HDAC9-213ENST00000433709 DGKGP49619 791 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 HYAL2Q12891 473 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 SNX29Q8TEQ0 813 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 NIF3L1Q9GZT8 377 aa9.64□□□□□ -0.87
HDAC9-213ENST00000433709 ORC1Q13415 861 aa9.63□□□□□ -0.87
HDAC9-213ENST00000433709 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
HDAC9-213ENST00000433709 LINC00114Q6XXX2 140 aa9.63□□□□□ -0.87
HDAC9-213ENST00000433709 LPIN3Q9BQK8 851 aa9.63□□□□□ -0.87
HDAC9-213ENST00000433709 ZBTB7CA1YPR0 619 aa9.62□□□□□ -0.87
HDAC9-213ENST00000433709 KIF4AO95239 1232 aa9.62□□□□□ -0.87
HDAC9-213ENST00000433709 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
HDAC9-213ENST00000433709 DMRTB1Q96MA1 342 aa9.62□□□□□ -0.87
HDAC9-213ENST00000433709 SMG9Q9H0W8 520 aaKnown RBP9.62□□□□□ -0.87
HDAC9-213ENST00000433709 ZFYVE28Q9HCC9 887 aa9.62□□□□□ -0.87
HDAC9-213ENST00000433709 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
HDAC9-213ENST00000433709 SALL4Q9UJQ4 1053 aa9.62□□□□□ -0.87
HDAC9-213ENST00000433709 RGS9O75916 674 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-213ENST00000433709 GHRHP01286 108 aa9.61□□□□□ -0.87
HDAC9-213ENST00000433709 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-213ENST00000433709 PLD4Q96BZ4 506 aa9.61□□□□□ -0.87
HDAC9-213ENST00000433709 PRDM2Q13029 1718 aa9.61□□□□□ -0.87
HDAC9-213ENST00000433709 LILRB5O75023 590 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 ACPPP15309 386 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 ATP11AP98196 1134 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 COL9A3Q14050 684 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-213ENST00000433709 USPL1Q5W0Q7 1092 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-213ENST00000433709 CEP120Q8N960 986 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 PMEPA1Q969W9 287 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 SPACA7Q96KW9 195 aa9.6□□□□□ -0.87
HDAC9-213ENST00000433709 TRIM26Q12899 539 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-213ENST00000433709 PODNQ7Z5L7 613 aa9.59□□□□□ -0.87
HDAC9-213ENST00000433709 ZSCAN29Q8IWY8 852 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-213ENST00000433709 ASB16Q96NS5 453 aa9.59□□□□□ -0.87
HDAC9-213ENST00000433709 RBSNQ9H1K0 784 aa9.59□□□□□ -0.87
HDAC9-213ENST00000433709 FRRS1LQ9P0K9 344 aa9.59□□□□□ -0.87
HDAC9-213ENST00000433709 MKL2Q9ULH7 1088 aa9.59□□□□□ -0.87
HDAC9-213ENST00000433709 TREHO43280 583 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 AFF1P51825 1210 aaKnown RBP9.58□□□□□ -0.88
HDAC9-213ENST00000433709 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 DSC3Q14574 896 aa9.58□□□□□ -0.88
HDAC9-213ENST00000433709 GRIK5Q16478 980 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms