RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
HDAC9-211ENST00000430454 ANKRD2Q9GZV1 360 aa11.59□□□□□ -0.55
HDAC9-211ENST00000430454 BSDC1Q9NW68 430 aaPredicted RBP11.59□□□□□ -0.55
HDAC9-211ENST00000430454 POLLQ9UGP5 575 aa11.59□□□□□ -0.55
HDAC9-211ENST00000430454 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
HDAC9-211ENST00000430454 ABT1Q9ULW3 272 aaKnown RBP11.59□□□□□ -0.55
HDAC9-211ENST00000430454 LRRC37AA6NMS7 1700 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 E9PSI1 815 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 JARID2Q92833 1246 aaPredicted RBP11.58□□□□□ -0.56
HDAC9-211ENST00000430454 AIDAQ96BJ3 306 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 PLA2G12BQ9BX93 195 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
HDAC9-211ENST00000430454 COL4A5P29400 1685 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
HDAC9-211ENST00000430454 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 ANKRD18BA2A2Z9 1011 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 ECE1P42892 770 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 DEFB115Q30KQ5 88 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 CDC37L1Q7L3B6 337 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 PODNQ7Z5L7 613 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 GREM2Q9H772 168 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
HDAC9-211ENST00000430454 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 PSMD14O00487 310 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 ALDH1L1O75891 902 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 KCNJ4P48050 445 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 MMP14P50281 582 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 IFIT5Q13325 482 aaKnown RBP11.56□□□□□ -0.56
HDAC9-211ENST00000430454 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 MICALL2Q8IY33 904 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 AGBL3Q8NEM8 1001 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 DCPSQ96C86 337 aaKnown RBP11.56□□□□□ -0.56
HDAC9-211ENST00000430454 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-211ENST00000430454 PGAP2Q9UHJ9 254 aa11.56□□□□□ -0.56
HDAC9-211ENST00000430454 ADAMTSL1Q8N6G6 1762 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 RASSF10A6NK89 507 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 CCER2I3L3R5 266 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 VIL1P09327 827 aaKnown RBP11.55□□□□□ -0.56
HDAC9-211ENST00000430454 ITGA6P23229 1130 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 CHMP3Q9Y3E7 222 aa11.55□□□□□ -0.56
HDAC9-211ENST00000430454 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 DUOX1Q9NRD9 1551 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 GRM8O00222 908 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 CSF1RP07333 972 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
HDAC9-211ENST00000430454 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
HDAC9-211ENST00000430454 CCT4P50991 539 aaKnown RBP11.54□□□□□ -0.56
HDAC9-211ENST00000430454 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-211ENST00000430454 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 SLC4A10Q6U841 1118 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
HDAC9-211ENST00000430454 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 OGFOD1Q8N543 542 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 BEGAINQ9BUH8 593 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 SRCIN1Q9C0H9 1055 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 COA1Q9GZY4 146 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 PTPRCP08575 1304 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 MYO3BQ8WXR4 1341 aa11.54□□□□□ -0.56
HDAC9-211ENST00000430454 TAF1P21675 1872 aa11.53□□□□□ -0.56
HDAC9-211ENST00000430454 CELF2O95319 508 aaKnown RBP11.53□□□□□ -0.56
HDAC9-211ENST00000430454 VEGFBP49765 207 aa11.53□□□□□ -0.56
HDAC9-211ENST00000430454 FAM161AQ3B820 660 aa11.53□□□□□ -0.56
HDAC9-211ENST00000430454 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-211ENST00000430454 SULF1Q8IWU6 871 aa11.53□□□□□ -0.56
HDAC9-211ENST00000430454 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-211ENST00000430454 ZNF804BA4D1E1 1349 aa11.53□□□□□ -0.56
HDAC9-211ENST00000430454 F6X3S4 739 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 CASP7P55210 303 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 KIF4BQ2VIQ3 1234 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 TBC1D10BQ4KMP7 808 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 KRT26Q7Z3Y9 468 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 HHIPL1Q96JK4 782 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 GPR101Q96P66 508 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 GLIS2Q9BZE0 524 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.57
HDAC9-211ENST00000430454 ZNF521Q96K83 1311 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 LTBP1Q14766 1721 aa11.52□□□□□ -0.57
HDAC9-211ENST00000430454 MYH3P11055 1940 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 TRAF5O00463 557 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-211ENST00000430454 ALDH1L2Q3SY69 923 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 C2orf69Q8N8R5 385 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 TRPM4Q8TD43 1214 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 FBXW7Q969H0 707 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 CNNM1Q9NRU3 951 aa11.51□□□□□ -0.57
HDAC9-211ENST00000430454 HDAC9Q9UKV0 1011 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms