RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 RGS22Q8NE09 1264 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 ATG3Q9NT62 314 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 RRP15Q9Y3B9 282 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 TTC41PQ6P2S7 1318 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 WASLO00401 505 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 BIN1O00499 593 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 ANKRD1Q15327 319 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 USP28Q96RU2 1077 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 IMPACTQ9P2X3 320 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 SRLQ86TD4 932 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 H3BQF6 201 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 ME1P48163 572 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 SIL1Q9H173 461 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 GTF2A1P52655 376 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 GUCY1B3Q02153 619 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 FBXO18Q8NFZ0 1043 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 SLC52A1Q9NWF4 448 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 PHLPP2Q6ZVD8 1323 aa12.9□□□□□ -0.34
SEMA4D-209ENST00000429836 EFCAB8A8MWE9 144 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 ISM2Q6H9L7 571 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 NAT10Q9H0A0 1025 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 CRYBG1Q9Y4K1 1723 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 FOXR1Q6PIV2 292 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 ZNF589Q86UQ0 364 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 AACSQ86V21 672 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 GOLGA5Q8TBA6 731 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
SEMA4D-209ENST00000429836 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 AK7Q96M32 723 aa12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 UTP14AQ9BVJ6 771 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 NRKQ7Z2Y5 1582 aa12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 HDGFL1Q5TGJ6 251 aa12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
SEMA4D-209ENST00000429836 ANKRD65E5RJM6 399 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 ANXA1P04083 346 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 ATP1A3P13637 1013 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 Q6ZUG5 572 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 PARD6BQ9BYG5 372 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 ATP8B1O43520 1251 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 NRDCO43847 1150 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 WDR24Q96S15 920 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 FSD1Q9BTV5 496 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 SCRN1Q12765 414 aa12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-209ENST00000429836 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 LOC102724159A0A0B4J2E5 919 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 NDUFA8P51970 172 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 PWP2Q15269 919 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 ICE2Q659A1 982 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 DPF2Q92785 391 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 EDC3Q96F86 508 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 GPATCH3Q96I76 525 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 SRRTQ9BXP5 876 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 ACTN2P35609 894 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 FANCCQ00597 558 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 VPS18Q9P253 973 aa12.86□□□□□ -0.35
SEMA4D-209ENST00000429836 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 VWA3AA6NCI4 1184 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 CHGBP05060 677 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 TPM1P09493 284 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 KCNJ6P48051 423 aa12.85□□□□□ -0.35
SEMA4D-209ENST00000429836 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms