RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 RBM43Q6ZSC3 357 aaKnown RBP12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 TECPR2O15040 1411 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 KCNQ3O43525 872 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 C11orf57Q6ZUT1 292 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 MYL6BP14649 208 aa12.52□□□□□ -0.4
ATP2C1-204ENST00000428331 RBM6P78332 1123 aaKnown RBP12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 ST3GAL1Q11201 340 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 KCNH5Q8NCM2 988 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 AEBP2Q6ZN18 517 aaPredicted RBP12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 JMYQ8N9B5 988 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 C8orf76Q96K31 380 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 URI1O94763 535 aaPredicted RBP12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 SASH1O94885 1247 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 IP6K1Q92551 441 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 IFNKQ9P0W0 207 aa12.52□□□□□ -0.41
ATP2C1-204ENST00000428331 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 MYD88Q99836 296 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 FAM193AP78312 1265 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 TSGA10IPQ3SY00 556 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 ZNF589Q86UQ0 364 aaPredicted RBP12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 USP28Q96RU2 1077 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 BIN1O00499 593 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 ZSCAN12O43309 604 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 APOBRQ0VD83 1088 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 IQCB1Q15051 598 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 TTC5Q8N0Z6 440 aa12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
ATP2C1-204ENST00000428331 ATP5JP18859 108 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 ARHGAP29Q52LW3 1261 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 PFKFB2O60825 505 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 TERF2Q15554 542 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 TNNT3P45378 269 aaPredicted RBP12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 EDC3Q96F86 508 aaKnown RBP12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 KLHDC4Q8TBB5 520 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
ATP2C1-204ENST00000428331 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 PPFIA3O75145 1194 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 TRDNQ13061 729 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 SLFNL1Q499Z3 407 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 SPATA31D1Q6ZQQ2 1576 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 CCDC129Q6ZRS4 1044 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 CCDC34Q96HJ3 373 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 SCRN1Q12765 414 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 WASHC4Q2M389 1173 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 NBPF6Q5VWK0 638 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 FBXO38Q6PIJ6 1188 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 NBPF4Q96M43 638 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 PSDA5PKW4 1024 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 POLR3DP05423 398 aaPredicted RBP12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 TRIM29Q14134 588 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 PDILTQ8N807 584 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 TBX22Q9Y458 520 aa12.49□□□□□ -0.41
ATP2C1-204ENST00000428331 USP27XA6NNY8 438 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 SPTLC2O15270 562 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 TOP1P11387 765 aaKnown RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 ADALQ6DHV7 355 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 ADCY9O60503 1353 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 FAM177A1Q8N128 213 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 XPO4Q9C0E2 1151 aaKnown RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 GOLIM4O00461 696 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 CYP21A2P08686 494 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 LTKP29376 864 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 LMOD1P29536 600 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 THEMISQ8N1K5 641 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 PTPRUQ92729 1446 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 TFCP2Q12800 502 aa12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 ORC3Q9UBD5 711 aaPredicted RBP12.48□□□□□ -0.41
ATP2C1-204ENST00000428331 UBASH3AP57075 661 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 ERCC4Q92889 916 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■□□□□ 10.5
ATP2C1-204ENST00000428331 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 CEP170BQ9Y4F5 1589 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 NYAP1Q6ZVC0 841 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 UBE3BQ7Z3V4 1068 aa12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 POLR3GO15318 223 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-204ENST00000428331 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms