RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 TTLL11Q8NHH1 800 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 GREM2Q9H772 168 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 SH2B1Q9NRF2 756 aaPredicted RBP16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 TAF6LQ9Y6J9 622 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 RIC1Q4ADV7 1423 aa16.75■□□□□ 0.27
APOBEC3D-202ENST00000427494 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 ADORA1P30542 326 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 CCDC158Q5M9N0 1113 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 TTC39AQ5SRH9 613 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 BARGINQ6ZT62 677 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 U3KPZ7 1027 aaPredicted RBP16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
APOBEC3D-202ENST00000427494 ANKRD18BA2A2Z9 1011 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 NCLP19338 710 aaKnown RBP16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 RPS6KB1P23443 525 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 XAGE2Q96GT9 111 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 RREB1Q92766 1687 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 KRT32Q14532 448 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 TICAM2Q86XR7 235 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 ZNF34Q8IZ26 560 aa16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
APOBEC3D-202ENST00000427494 CICQ96RK0 1608 aaPredicted RBP16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 PDE8AO60658 829 aa16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 EIF5P55010 431 aaKnown RBP16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 SIK1P57059 783 aa16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 COL9A3Q14050 684 aaPredicted RBP16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 LDHAL6AQ6ZMR3 332 aa16.72■□□□□ 0.27
APOBEC3D-202ENST00000427494 FKBP4Q02790 459 aaKnown RBP eCLIP16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 ANKRD1Q15327 319 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 ME3Q16798 604 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 ZMYM1Q5SVZ6 1142 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 TPCN1Q9ULQ1 816 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 RNF113AO15541 343 aaKnown RBP16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 MRE11P49959 708 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
APOBEC3D-202ENST00000427494 GJB2P29033 226 aa16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 ITPK1Q13572 414 aa16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
APOBEC3D-202ENST00000427494 STX6O43752 255 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 NEK1Q96PY6 1258 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 CYP21A2P08686 494 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 ZSCAN22P10073 491 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 SYT1P21579 422 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 FOXD4L6Q3SYB3 417 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 FOXD4L3Q6VB84 417 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 GAS2L3Q86XJ1 694 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 DSCC1Q9BVC3 393 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 MAST3O60307 1309 aa16.69■□□□□ 0.26
APOBEC3D-202ENST00000427494 ABCC12Q96J65 1359 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 LAMA4Q16363 1823 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 LRP5O75197 1615 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 MYH7P12883 1935 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 FAM177BA6PVY3 158 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 CAMTA2O94983 1202 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 SCARF1Q14162 830 aa16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 FAM98CQ17RN3 349 aaKnown RBP16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3D-202ENST00000427494 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 M0R2C6 588 aa16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 KCNQ2O43526 872 aa16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 DTNBO60941 627 aa16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 ZAP70P43403 619 aa16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 AK7Q96M32 723 aa16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 PANK2Q9BZ23 570 aa16.67■□□□□ 0.26
APOBEC3D-202ENST00000427494 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 HSPD1P10809 573 aaKnown RBP16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 VGLL2Q8N8G2 317 aa16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 UTP14AQ9BVJ6 771 aaKnown RBP16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 MBD3O95983 291 aa16.66■□□□□ 0.26
APOBEC3D-202ENST00000427494 F13A1P00488 732 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms