RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 ST13P50502 369 aaKnown RBP9.34□□□□□ -0.91
SSBP3-207ENST00000426150 ZNF394Q53GI3 561 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 KRT25Q7Z3Z0 450 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 SLC43A3Q8NBI5 491 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 UBXN4Q92575 508 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 KANSL3Q9P2N6 904 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 GGT7Q9UJ14 662 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 PCDHGB7Q9Y5F8 929 aa9.34□□□□□ -0.91
SSBP3-207ENST00000426150 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-207ENST00000426150 URB2Q14146 1524 aaKnown RBP9.33□□□□□ -0.92
SSBP3-207ENST00000426150 DCDC2BA2VCK2 349 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 KHNYNO15037 678 aaKnown RBP9.33□□□□□ -0.92
SSBP3-207ENST00000426150 MMP20O60882 483 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 EDN3P14138 238 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 TNNI2P48788 182 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
SSBP3-207ENST00000426150 UBAP2LQ14157 1087 aaKnown RBP9.33□□□□□ -0.92
SSBP3-207ENST00000426150 KIAA0319Q5VV43 1072 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 USP48Q86UV5 1035 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 ZNF654Q8IZM8 581 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 OR13H1Q8NG92 308 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 LATS2Q9NRM7 1088 aa9.33□□□□□ -0.92
SSBP3-207ENST00000426150 ZNF608Q9ULD9 1512 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-207ENST00000426150 A0A1W2PP55 124 aa9.32□□□□□ -0.92
SSBP3-207ENST00000426150 TNP2Q05952 138 aa9.32□□□□□ -0.92
SSBP3-207ENST00000426150 GLIS3Q8NEA6 775 aa9.32□□□□□ -0.92
SSBP3-207ENST00000426150 NUCKS1Q9H1E3 243 aaKnown RBP9.32□□□□□ -0.92
SSBP3-207ENST00000426150 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
SSBP3-207ENST00000426150 ATP13A2Q9NQ11 1180 aa9.32□□□□□ -0.92
SSBP3-207ENST00000426150 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 POTECB2RU33 542 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 RARAP10276 462 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 MAPTP10636 758 aaKnown RBP9.31□□□□□ -0.92
SSBP3-207ENST00000426150 GSTT1P30711 240 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 PTSQ03393 145 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 LAMC2Q13753 1193 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 GNL2Q13823 731 aaKnown RBP9.31□□□□□ -0.92
SSBP3-207ENST00000426150 PEAR1Q5VY43 1037 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-207ENST00000426150 TANGO6Q9C0B7 1094 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 EHD4Q9H223 541 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 ZFATQ9P243 1243 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 SALL4Q9UJQ4 1053 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
SSBP3-207ENST00000426150 SLC35F4A4IF30 521 aa9.3□□□□□ -0.92
SSBP3-207ENST00000426150 GRIN2CQ14957 1233 aa9.3□□□□□ -0.92
SSBP3-207ENST00000426150 C3orf58Q8NDZ4 430 aa9.3□□□□□ -0.92
SSBP3-207ENST00000426150 PPP4R2Q9NY27 417 aa9.3□□□□□ -0.92
SSBP3-207ENST00000426150 H7C1W4 665 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 PRPF40BQ6NWY9 871 aaKnown RBP9.29□□□□□ -0.92
SSBP3-207ENST00000426150 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 PNMA5Q96PV4 448 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 AAASQ9NRG9 546 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 NDFIP2Q9NV92 336 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 PRKAG2Q9UGJ0 569 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 DACH1Q9UI36 760 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 HCN2Q9UL51 889 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 INPP5FQ9Y2H2 1132 aa9.29□□□□□ -0.92
SSBP3-207ENST00000426150 ST8SIA5O15466 376 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 BNIP3LO60238 219 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 NFKB1P19838 968 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 DBN1Q16643 649 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 GMLQ99445 158 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-207ENST00000426150 TLR7Q9NYK1 1049 aaKnown RBP9.28□□□□□ -0.92
SSBP3-207ENST00000426150 MARK1Q9P0L2 795 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
SSBP3-207ENST00000426150 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-207ENST00000426150 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
SSBP3-207ENST00000426150 LCE2BO14633 110 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 MAP3K6O95382 1288 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 SOX18P35713 384 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 FCGRTP55899 365 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 NOC4LQ9BVI4 516 aaKnown RBP9.27□□□□□ -0.93
SSBP3-207ENST00000426150 EFCC1Q9HA90 598 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 COPRSQ9NQ92 184 aa9.27□□□□□ -0.93
SSBP3-207ENST00000426150 RSF1Q96T23 1441 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-207ENST00000426150 KIF4AO95239 1232 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 PSAPP07602 524 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 HOXD8P13378 290 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-207ENST00000426150 COL13A1Q5TAT6 717 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-207ENST00000426150 CCDC155Q8N6L0 562 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 TCF12Q99081 682 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 SLC30A3Q99726 388 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-207ENST00000426150 LIN7BQ9HAP6 207 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 ABCB6Q9NP58 842 aa9.26□□□□□ -0.93
SSBP3-207ENST00000426150 CHD1O14646 1710 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 TMEM238LA0A1B0GVL6 79 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 DNAJA1P31689 397 aaKnown RBP9.25□□□□□ -0.93
SSBP3-207ENST00000426150 HYAL2Q12891 473 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 BHMTQ93088 406 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 CNTNAP3BQ96NU0 1288 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 ZKSCAN3Q9BRR0 538 aa9.25□□□□□ -0.93
SSBP3-207ENST00000426150 CNTNAP3Q9BZ76 1288 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms