RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-207ENST00000426142 KIF4BQ2VIQ3 1234 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 VPS36Q86VN1 386 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 ORAI2Q96SN7 254 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 PCDH11XQ9BZA7 1347 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 PCDH11YQ9BZA8 1340 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 ZSCAN12O43309 604 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 EIF3JO75822 258 aaKnown RBP9.11□□□□□ -0.95
CTNND1-207ENST00000426142 UBXN4Q92575 508 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 BICD1Q96G01 975 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 MARCKSP29966 332 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-207ENST00000426142 PLS1Q14651 629 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 CEP85Q6P2H3 762 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 GIMAP6Q6P9H5 292 aa9.11□□□□□ -0.95
CTNND1-207ENST00000426142 PUF60Q9UHX1 559 aaKnown RBP9.11□□□□□ -0.95
CTNND1-207ENST00000426142 YTHDC2Q9H6S0 1430 aaKnown RBP9.1□□□□□ -0.95
CTNND1-207ENST00000426142 EIF2AK4Q9P2K8 1649 aaKnown RBP9.1□□□□□ -0.95
CTNND1-207ENST00000426142 KIF20AO95235 890 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 YEATS4O95619 227 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 RXRAP19793 462 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 LINS1Q8NG48 757 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 CCDC113Q9H0I3 377 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 MCM9Q9NXL9 1143 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 PRC1O43663 620 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 ZSCAN22P10073 491 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-207ENST00000426142 IP6K1Q92551 441 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 ZC3H12CQ9C0D7 883 aaKnown RBP9.1□□□□□ -0.95
CTNND1-207ENST00000426142 WDR62O43379 1518 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 CCDC102BQ68D86 513 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 FAM89AQ96GI7 184 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 TESK2Q96S53 571 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 CNNM2Q9H8M5 875 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 PARD3Q8TEW0 1356 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 KIF21AQ7Z4S6 1674 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 CETN2P41208 172 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 NAPAP54920 295 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 G2E3Q7L622 706 aa9.1□□□□□ -0.95
CTNND1-207ENST00000426142 POLR3AO14802 1390 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 ZRSR2Q15696 482 aaKnown RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 ZSCAN30Q86W11 494 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 EXOC1Q9NV70 894 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 RNF113AO15541 343 aaKnown RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 TBCAO75347 108 aaKnown RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 ADCY5O95622 1261 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 CALM1P0DP23 149 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 CALM2P0DP24 149 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 CALM3P0DP25 149 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 SYKP43405 635 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 ANAPC15P60006 121 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 APOBRQ0VD83 1088 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 ZKSCAN3Q9BRR0 538 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 TRPM2O94759 1503 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 RBM25P49756 843 aaKnown RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 RRAGBQ5VZM2 374 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 C16orf45Q96MC5 204 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 DNAI2Q9GZS0 605 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 SAP30BPQ9UHR5 308 aaKnown RBP9.09□□□□□ -0.95
CTNND1-207ENST00000426142 STAT6P42226 847 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 LUZP1Q86V48 1076 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 CCDC24Q8N4L8 307 aa9.09□□□□□ -0.95
CTNND1-207ENST00000426142 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-207ENST00000426142 ZNF165P49910 485 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 UBE2HP62256 183 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 TMCO5BA8MYB1 307 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 KIAA0754O94854 1291 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 SMARCC2Q8TAQ2 1214 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 FERMT2Q96AC1 680 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 PLCD4Q9BRC7 762 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 EIF4G3O43432 1585 aaKnown RBP9.08□□□□□ -0.96
CTNND1-207ENST00000426142 USO1O60763 962 aaKnown RBP9.08□□□□□ -0.96
CTNND1-207ENST00000426142 NBPF7P0C2Y1 421 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-207ENST00000426142 CETN1Q12798 172 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 PRPF4BQ13523 1007 aaKnown RBP9.08□□□□□ -0.96
CTNND1-207ENST00000426142 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 ZSCAN16Q9H4T2 348 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-207ENST00000426142 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
CTNND1-207ENST00000426142 LDHBP07195 334 aaKnown RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 CA8P35219 290 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 VTI1AQ96AJ9 217 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 GSTTP1A0A1W2PQM5 241 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 POLD1P28340 1107 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 NOP2P46087 812 aaKnown RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 ZSCAN23Q3MJ62 389 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 TMTC2Q8N394 836 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 CCNL1Q9UK58 526 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 FAM98CQ17RN3 349 aaKnown RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 ERICH4A6NGS2 130 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 CTNNA2P26232 953 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 DNM1Q05193 864 aaKnown RBP9.07□□□□□ -0.96
CTNND1-207ENST00000426142 STXBP4Q6ZWJ1 553 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 CRACR2AQ9BSW2 395 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
CTNND1-207ENST00000426142 ZNF790Q6PG37 636 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms