RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
TUBA4A-204ENST00000425551 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
TUBA4A-204ENST00000425551 NYXQ9GZU5 481 aa12.96□□□□□ -0.33
TUBA4A-204ENST00000425551 RALBP1Q15311 655 aa12.95□□□□□ -0.34
TUBA4A-204ENST00000425551 SLC10A5Q5PT55 438 aa12.95□□□□□ -0.34
TUBA4A-204ENST00000425551 CD99L2Q8TCZ2 262 aa12.95□□□□□ -0.34
TUBA4A-204ENST00000425551 LRCH3Q96II8 777 aa12.95□□□□□ -0.34
TUBA4A-204ENST00000425551 ERVV-1B6SEH8 477 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 ECE2O60344 883 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 VPS33BQ9H267 617 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
TUBA4A-204ENST00000425551 PDIA6Q15084 440 aa12.93□□□□□ -0.34
TUBA4A-204ENST00000425551 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
TUBA4A-204ENST00000425551 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TUBA4A-204ENST00000425551 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
TUBA4A-204ENST00000425551 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 PRO3102Q9H379 93 aa12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
TUBA4A-204ENST00000425551 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 RGL2O15211 777 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 BBOX1O75936 387 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 GRAPQ13588 217 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 GRAPLQ8TC17 118 aaPredicted RBP12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 ARMC5Q96C12 935 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 GMLQ99445 158 aa12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 NSFL1CQ9UNZ2 370 aaKnown RBP12.91□□□□□ -0.34
TUBA4A-204ENST00000425551 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
TUBA4A-204ENST00000425551 GJA5P36382 358 aa12.9□□□□□ -0.34
TUBA4A-204ENST00000425551 ZNF280AP59817 542 aaPredicted RBP12.9□□□□□ -0.34
TUBA4A-204ENST00000425551 UTP14AQ9BVJ6 771 aaKnown RBP12.9□□□□□ -0.34
TUBA4A-204ENST00000425551 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 C6orf229H3BNL8 230 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 NOM1Q5C9Z4 860 aaKnown RBP12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 NLRP10Q86W26 655 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 PTPN18Q99952 460 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
TUBA4A-204ENST00000425551 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 TTLL12Q14166 644 aaPredicted RBP12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 SHISA4Q96DD7 197 aa12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 PCDHAC2Q9Y5I4 1007 aa12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 AOX1Q06278 1338 aa12.88□□□□□ -0.35
TUBA4A-204ENST00000425551 CRHR2Q13324 411 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 Q7L0L9 218 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 MYOZ2Q9NPC6 264 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 PTCH2Q9Y6C5 1203 aa12.87□□□□□ -0.35
TUBA4A-204ENST00000425551 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
TUBA4A-204ENST00000425551 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
TUBA4A-204ENST00000425551 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
TUBA4A-204ENST00000425551 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
TUBA4A-204ENST00000425551 NECTIN2Q92692 538 aa12.86□□□□□ -0.35
TUBA4A-204ENST00000425551 ARHGAP39Q9C0H5 1083 aa12.86□□□□□ -0.35
TUBA4A-204ENST00000425551 ANKRD36CQ5JPF3 1778 aa12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 SASH1O94885 1247 aa12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 RPS12P25398 132 aaKnown RBP12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 MTFR1Q15390 333 aa12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 INTS3Q68E01 1043 aaKnown RBP12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 PPP1R42Q7Z4L9 355 aa12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 ZNF609O15014 1411 aa12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 SSC5DA1L4H1 1573 aa12.85□□□□□ -0.35
TUBA4A-204ENST00000425551 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 FKBP1BP68106 108 aa12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 TMX4Q9H1E5 349 aaPredicted RBP12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 RAPGEFL1Q9UHV5 662 aa12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 EYSQ5T1H1 3165 aa12.84□□□□□ -0.35
TUBA4A-204ENST00000425551 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 AIMP1Q12904 312 aaKnown RBP12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 EFCC1Q9HA90 598 aa12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 TRMT112Q9UI30 125 aaKnown RBP12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
TUBA4A-204ENST00000425551 WNT10BO00744 389 aa12.82□□□□□ -0.36
TUBA4A-204ENST00000425551 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms