RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 PARP10Q53GL7 1025 aa12.73□□□□□ -0.37
SMIM27-201ENST00000425533 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SMIM27-201ENST00000425533 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
SMIM27-201ENST00000425533 DDX46Q7L014 1031 aaKnown RBP12.73□□□□□ -0.37
SMIM27-201ENST00000425533 MCM10Q7L590 875 aa12.73□□□□□ -0.37
SMIM27-201ENST00000425533 UTP14AQ9BVJ6 771 aaKnown RBP12.73□□□□□ -0.37
SMIM27-201ENST00000425533 ZNF280AP59817 542 aaPredicted RBP12.72□□□□□ -0.37
SMIM27-201ENST00000425533 CD99L2Q8TCZ2 262 aa12.72□□□□□ -0.37
SMIM27-201ENST00000425533 ERO1AQ96HE7 468 aa12.72□□□□□ -0.37
SMIM27-201ENST00000425533 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
SMIM27-201ENST00000425533 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
SMIM27-201ENST00000425533 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
SMIM27-201ENST00000425533 PSME4Q14997 1843 aa12.72□□□□□ -0.37
SMIM27-201ENST00000425533 C6orf229H3BNL8 230 aa12.71□□□□□ -0.37
SMIM27-201ENST00000425533 HCLS1P14317 486 aaPredicted RBP12.71□□□□□ -0.37
SMIM27-201ENST00000425533 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
SMIM27-201ENST00000425533 TCIRG1Q13488 830 aa12.71□□□□□ -0.37
SMIM27-201ENST00000425533 TMC4Q7Z404 712 aa12.71□□□□□ -0.37
SMIM27-201ENST00000425533 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
SMIM27-201ENST00000425533 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.38
SMIM27-201ENST00000425533 CUL9Q8IWT3 2517 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 COL4A1P02462 1669 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 CAP1Q01518 475 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 SPRYD7Q5W111 196 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 RTF1Q92541 710 aaKnown RBP12.7□□□□□ -0.38
SMIM27-201ENST00000425533 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 MYOZ2Q9NPC6 264 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 CEP290O15078 2479 aa12.7□□□□□ -0.38
SMIM27-201ENST00000425533 LAMA3Q16787 3333 aa12.69□□□□□ -0.38
SMIM27-201ENST00000425533 PRKAR2BP31323 418 aa12.69□□□□□ -0.38
SMIM27-201ENST00000425533 GPSM2P81274 684 aa12.69□□□□□ -0.38
SMIM27-201ENST00000425533 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
SMIM27-201ENST00000425533 PRO3102Q9H379 93 aa12.69□□□□□ -0.38
SMIM27-201ENST00000425533 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
SMIM27-201ENST00000425533 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMIM27-201ENST00000425533 NF2P35240 595 aa12.68□□□□□ -0.38
SMIM27-201ENST00000425533 INHBEP58166 350 aa12.68□□□□□ -0.38
SMIM27-201ENST00000425533 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
SMIM27-201ENST00000425533 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
SMIM27-201ENST00000425533 EYA3Q99504 573 aa12.68□□□□□ -0.38
SMIM27-201ENST00000425533 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
SMIM27-201ENST00000425533 SOX1O00570 391 aaPredicted RBP12.67□□□□□ -0.38
SMIM27-201ENST00000425533 USP17L8P0C7I0 530 aa12.67□□□□□ -0.38
SMIM27-201ENST00000425533 PRKG1Q13976 671 aa12.67□□□□□ -0.38
SMIM27-201ENST00000425533 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
SMIM27-201ENST00000425533 SLC9C1Q4G0N8 1177 aa12.67□□□□□ -0.38
SMIM27-201ENST00000425533 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
SMIM27-201ENST00000425533 TBC1D16Q8TBP0 767 aa12.67□□□□□ -0.38
SMIM27-201ENST00000425533 CELF1Q92879 486 aaKnown RBP12.67□□□□□ -0.38
SMIM27-201ENST00000425533 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
SMIM27-201ENST00000425533 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
SMIM27-201ENST00000425533 CRHR2Q13324 411 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 ARMC9Q7Z3E5 817 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 DPF3Q92784 378 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 GMLQ99445 158 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
SMIM27-201ENST00000425533 ZC3H12CQ9C0D7 883 aaKnown RBP12.66□□□□□ -0.38
SMIM27-201ENST00000425533 PTCH2Q9Y6C5 1203 aa12.66□□□□□ -0.38
SMIM27-201ENST00000425533 WTIPA6NIX2 430 aaPredicted RBP12.65□□□□□ -0.38
SMIM27-201ENST00000425533 SP3Q02447 781 aa12.65□□□□□ -0.38
SMIM27-201ENST00000425533 NLRP10Q86W26 655 aa12.65□□□□□ -0.38
SMIM27-201ENST00000425533 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
SMIM27-201ENST00000425533 G3V3G9 751 aa12.64□□□□□ -0.39
SMIM27-201ENST00000425533 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
SMIM27-201ENST00000425533 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
SMIM27-201ENST00000425533 THUMPD2Q9BTF0 503 aaKnown RBP12.64□□□□□ -0.39
SMIM27-201ENST00000425533 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
SMIM27-201ENST00000425533 ANGEL1Q9UNK9 670 aaKnown RBP12.64□□□□□ -0.39
SMIM27-201ENST00000425533 FZD1Q9UP38 647 aa12.64□□□□□ -0.39
SMIM27-201ENST00000425533 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
SMIM27-201ENST00000425533 ZNF646O15015 1829 aaPredicted RBP12.63□□□□□ -0.39
SMIM27-201ENST00000425533 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
SMIM27-201ENST00000425533 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
SMIM27-201ENST00000425533 CC2D1BQ5T0F9 858 aaKnown RBP12.63□□□□□ -0.39
SMIM27-201ENST00000425533 SLC10A4Q96EP9 437 aa12.63□□□□□ -0.39
SMIM27-201ENST00000425533 A0A1W2PPC1 479 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 WNT10BO00744 389 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 HTATSF1O43719 755 aaKnown RBP12.62□□□□□ -0.39
SMIM27-201ENST00000425533 HSPA5P11021 654 aaKnown RBP12.62□□□□□ -0.39
SMIM27-201ENST00000425533 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 SHISA4Q96DD7 197 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
SMIM27-201ENST00000425533 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
SMIM27-201ENST00000425533 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
SMIM27-201ENST00000425533 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
SMIM27-201ENST00000425533 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 UFL1O94874 794 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMIM27-201ENST00000425533 PDIA6Q15084 440 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
SMIM27-201ENST00000425533 HSP90AB3PQ58FF7 597 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms