RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
VPS37A-202ENST00000425020 MRPS27Q92552 414 aaKnown RBP11.85□□□□□ -0.51
VPS37A-202ENST00000425020 IFNKQ9P0W0 207 aa11.85□□□□□ -0.51
VPS37A-202ENST00000425020 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 EPB41L2O43491 1005 aaKnown RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 GNG11P61952 73 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 KIF4BQ2VIQ3 1234 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 SMARCE1Q969G3 411 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 CEP89Q96ST8 783 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 EPS15P42566 896 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 UBASH3AP57075 661 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 SSRP1Q08945 709 aaKnown RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 DHX32Q7L7V1 743 aaKnown RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 SSH3Q8TE77 659 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 hCG_1642624A0A1W2PR95 340 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 RPS6KB1P23443 525 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 PTPN21Q16825 1174 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
VPS37A-202ENST00000425020 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
VPS37A-202ENST00000425020 SYNMO15061 1565 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 ZBTB43O43298 467 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 RUFY1Q96T51 708 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 FTOQ9C0B1 505 aaKnown RBP eCLIP11.83□□□□□ -0.52
VPS37A-202ENST00000425020 CENPHQ9H3R5 247 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 SPTLC2O15270 562 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 CBFA2T2O43439 604 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 KRT18P05783 430 aaKnown RBP11.83□□□□□ -0.52
VPS37A-202ENST00000425020 NOM1Q5C9Z4 860 aaKnown RBP11.83□□□□□ -0.52
VPS37A-202ENST00000425020 TMCO3Q6UWJ1 677 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 ARHGEF5Q12774 1597 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
VPS37A-202ENST00000425020 PHKBQ93100 1093 aa11.83□□□□□ -0.52
VPS37A-202ENST00000425020 CTAGE5O15320 804 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 SBNO1A3KN83 1393 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 B4E1Z4 1266 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 RIOK3O14730 519 aaKnown RBP11.82□□□□□ -0.52
VPS37A-202ENST00000425020 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
VPS37A-202ENST00000425020 PRDM1O75626 825 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 IL15P40933 162 aaPredicted RBP11.82□□□□□ -0.52
VPS37A-202ENST00000425020 GCKRQ14397 625 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 NR1I2O75469 434 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 BEND3Q5T5X7 828 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 PLIN2Q99541 437 aa11.82□□□□□ -0.52
VPS37A-202ENST00000425020 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
VPS37A-202ENST00000425020 U2AF2P26368 475 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■■□□ 15.7
VPS37A-202ENST00000425020 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 NLRP5P59047 1200 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 STX8Q9UNK0 236 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 SETD1BQ9UPS6 1966 aaKnown RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 SYT10Q6XYQ8 523 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 KARSQ15046 597 aaKnown RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 KIF2CQ99661 725 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 TAF5LO75529 589 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 SLC5A1P13866 664 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 ZNF589Q86UQ0 364 aaPredicted RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 IQCA1Q86XH1 822 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 NUP88Q99567 741 aaPredicted RBP11.81□□□□□ -0.52
VPS37A-202ENST00000425020 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 SLC4A4Q9Y6R1 1079 aa11.81□□□□□ -0.52
VPS37A-202ENST00000425020 RNF113AO15541 343 aaKnown RBP11.8□□□□□ -0.52
VPS37A-202ENST00000425020 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS37A-202ENST00000425020 TTLL7Q6ZT98 887 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 ZSCAN29Q8IWY8 852 aaPredicted RBP11.8□□□□□ -0.52
VPS37A-202ENST00000425020 STAMQ92783 540 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 DHX58Q96C10 678 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 ANKIB1Q9P2G1 1089 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 DACH1Q9UI36 760 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 EXOC5O00471 708 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
VPS37A-202ENST00000425020 CYP7A1P22680 504 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 MEX3CQ5U5Q3 659 aaKnown RBP11.8□□□□□ -0.52
VPS37A-202ENST00000425020 IDEP14735 1019 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 SOGA3Q5TF21 947 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 KIAA1328Q86T90 577 aa11.8□□□□□ -0.52
VPS37A-202ENST00000425020 CCDC12Q8WUD4 166 aaPredicted RBP11.8□□□□□ -0.52
VPS37A-202ENST00000425020 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms