RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 FAM196AQ6ZSG2 479 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 NOL8Q76FK4 1167 aaKnown RBP19.84■□□□□ 0.77
CMTM3-202ENST00000424011 KBTBD3Q8NAB2 608 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 LINC00116Q8NCU8 138 aa19.84■□□□□ 0.77
CMTM3-202ENST00000424011 BCL11BQ9C0K0 894 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-202ENST00000424011 MED23Q9ULK4 1368 aa19.83■□□□□ 0.77
CMTM3-202ENST00000424011 SH3TC1Q8TE82 1336 aa19.83■□□□□ 0.77
CMTM3-202ENST00000424011 A0A0D9SFI3 127 aa19.83■□□□□ 0.76
CMTM3-202ENST00000424011 CAMTA2O94983 1202 aa19.83■□□□□ 0.76
CMTM3-202ENST00000424011 RNF20Q5VTR2 975 aa19.83■□□□□ 0.76
CMTM3-202ENST00000424011 FBXO41Q8TF61 875 aa19.83■□□□□ 0.76
CMTM3-202ENST00000424011 BTAF1O14981 1849 aa19.83■□□□□ 0.76
CMTM3-202ENST00000424011 NECTIN1Q15223 517 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 LDHAL6AQ6ZMR3 332 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 CCDC85AQ96PX6 553 aaPredicted RBP19.82■□□□□ 0.76
CMTM3-202ENST00000424011 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
CMTM3-202ENST00000424011 TM6SF1Q9BZW5 370 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 GREM2Q9H772 168 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 NUP98P52948 1817 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 KCNQ4P56696 695 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 CUL4AQ13619 759 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 GORABQ5T7V8 394 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 SYNE4Q8N205 404 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 INTS4Q96HW7 963 aaKnown RBP19.82■□□□□ 0.76
CMTM3-202ENST00000424011 PAG1Q9NWQ8 432 aa19.82■□□□□ 0.76
CMTM3-202ENST00000424011 IFIT1P09914 478 aaKnown RBP19.81■□□□□ 0.76
CMTM3-202ENST00000424011 PTMSP20962 102 aa19.81■□□□□ 0.76
CMTM3-202ENST00000424011 RASEFQ8IZ41 740 aa19.81■□□□□ 0.76
CMTM3-202ENST00000424011 EDC3Q96F86 508 aaKnown RBP19.81■□□□□ 0.76
CMTM3-202ENST00000424011 ZDHHC9Q9Y397 364 aa19.81■□□□□ 0.76
CMTM3-202ENST00000424011 RBM8AQ9Y5S9 174 aaKnown RBP19.81■□□□□ 0.76
CMTM3-202ENST00000424011 ESPNB1AK53 854 aa19.81■□□□□ 0.76
CMTM3-202ENST00000424011 LRRFIP1Q32MZ4 808 aaKnown RBP19.81■□□□□ 0.76
CMTM3-202ENST00000424011 PRPF40BQ6NWY9 871 aaKnown RBP19.81■□□□□ 0.76
CMTM3-202ENST00000424011 RIPOR2Q9Y4F9 1068 aa19.81■□□□□ 0.76
CMTM3-202ENST00000424011 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
CMTM3-202ENST00000424011 RGL2O15211 777 aa19.8■□□□□ 0.76
CMTM3-202ENST00000424011 METTL24Q5JXM2 366 aa19.8■□□□□ 0.76
CMTM3-202ENST00000424011 CLEC4GQ6UXB4 293 aa19.8■□□□□ 0.76
CMTM3-202ENST00000424011 CNNM1Q9NRU3 951 aa19.8■□□□□ 0.76
CMTM3-202ENST00000424011 MYH14Q7Z406 1995 aaKnown RBP19.8■□□□□ 0.76
CMTM3-202ENST00000424011 SUSD4Q5VX71 490 aa19.8■□□□□ 0.76
CMTM3-202ENST00000424011 CCNL1Q9UK58 526 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-202ENST00000424011 PRDM4Q9UKN5 801 aa19.8■□□□□ 0.76
CMTM3-202ENST00000424011 CNTNAP4Q9C0A0 1308 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 COL5A3P25940 1745 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-202ENST00000424011 PSMA5P28066 241 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 MRE11P49959 708 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 SKOR2Q2VWA4 1001 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-202ENST00000424011 MCMDC2Q4G0Z9 681 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 TTC39AQ5SRH9 613 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 DDX46Q7L014 1031 aaKnown RBP19.79■□□□□ 0.76
CMTM3-202ENST00000424011 HMG20BQ9P0W2 317 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 ABCC12Q96J65 1359 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 GOLGA6L22H0YM25 854 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 GOLIM4O00461 696 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
CMTM3-202ENST00000424011 RC3H1Q5TC82 1133 aaKnown RBP19.79■□□□□ 0.76
CMTM3-202ENST00000424011 CREB3L3Q68CJ9 461 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 XAGE2Q96GT9 111 aa19.79■□□□□ 0.76
CMTM3-202ENST00000424011 EP400Q96L91 3159 aa19.78■□□□□ 0.76
CMTM3-202ENST00000424011 CASTP20810 708 aaKnown RBP19.78■□□□□ 0.76
CMTM3-202ENST00000424011 TTC14Q96N46 770 aa19.78■□□□□ 0.76
CMTM3-202ENST00000424011 NIP7Q9Y221 180 aaKnown RBP eCLIP19.78■□□□□ 0.76
CMTM3-202ENST00000424011 ATP2B3Q16720 1220 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 ZSWIM6Q9HCJ5 1215 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 HELLSQ9NRZ9 838 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 CYP46A1Q9Y6A2 500 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 TAF5LO75529 589 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 RXRBP28702 533 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 VPS53Q5VIR6 699 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 MCTP1Q6DN14 999 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 JAKMIP1Q96N16 626 aaKnown RBP19.77■□□□□ 0.76
CMTM3-202ENST00000424011 NDUFB9Q9Y6M9 179 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 BRWD3Q6RI45 1802 aa19.77■□□□□ 0.76
CMTM3-202ENST00000424011 SPEF2Q9C093 1822 aa19.77■□□□□ 0.75
CMTM3-202ENST00000424011 ZNF589Q86UQ0 364 aaPredicted RBP19.76■□□□□ 0.75
CMTM3-202ENST00000424011 MROH5Q6ZUA9 1318 aa19.76■□□□□ 0.75
CMTM3-202ENST00000424011 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
CMTM3-202ENST00000424011 SLC27A2O14975 620 aa19.76■□□□□ 0.75
CMTM3-202ENST00000424011 LIMCH1Q9UPQ0 1083 aa19.76■□□□□ 0.75
CMTM3-202ENST00000424011 U3KPZ7 1027 aaPredicted RBP19.76■□□□□ 0.75
CMTM3-202ENST00000424011 TSGA10IPQ3SY00 556 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 CCDC152Q4G0S7 254 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 USPL1Q5W0Q7 1092 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 RGS17Q9UGC6 210 aaPredicted RBP19.75■□□□□ 0.75
CMTM3-202ENST00000424011 MYH3P11055 1940 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 PDE8BO95263 885 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 KRT32Q14532 448 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 RUFY3Q7L099 469 aa19.75■□□□□ 0.75
CMTM3-202ENST00000424011 ZNF512BQ96KM6 892 aaPredicted RBP19.75■□□□□ 0.75
CMTM3-202ENST00000424011 TRIM37O94972 964 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 NTSR2O95665 410 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 AK2P54819 239 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 PDRG1Q9NUG6 133 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 RTL9Q8NET4 1388 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 RPS6KA4O75676 772 aa19.74■□□□□ 0.75
CMTM3-202ENST00000424011 ZFYP08048 801 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-202ENST00000424011 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
CMTM3-202ENST00000424011 ADORA1P30542 326 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms