RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
CDCA3-202ENST00000422785 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 GPTP24298 496 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
CDCA3-202ENST00000422785 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
CDCA3-202ENST00000422785 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
CDCA3-202ENST00000422785 PDIA4P13667 645 aaKnown RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 TOB2Q14106 344 aaPredicted RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 SYNE4Q8N205 404 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 XAGE2Q96GT9 111 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 ATP6V1DQ9Y5K8 247 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 ADAMTS2O95450 1211 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 F13A1P00488 732 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 DDB1Q16531 1140 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 NECAB1Q8N987 351 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 PKNOX2Q96KN3 472 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 NSFL1CQ9UNZ2 370 aaKnown RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 NUP98P52948 1817 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 CYP21A2P08686 494 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 CTSWP56202 376 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
CDCA3-202ENST00000422785 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
CDCA3-202ENST00000422785 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 TCEANC2Q96MN5 208 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 IRS4O14654 1257 aaPredicted RBP16.42■□□□□ 0.22
CDCA3-202ENST00000422785 ITGA6P23229 1130 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 ADORA1P30542 326 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
CDCA3-202ENST00000422785 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
CDCA3-202ENST00000422785 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
CDCA3-202ENST00000422785 USP48Q86UV5 1035 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
CDCA3-202ENST00000422785 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
CDCA3-202ENST00000422785 GREM2Q9H772 168 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 MYH3P11055 1940 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 ANKRD18BA2A2Z9 1011 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 TBC1D2BQ9UPU7 963 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 ABCC12Q96J65 1359 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 RIC1Q4ADV7 1423 aa16.41■□□□□ 0.22
CDCA3-202ENST00000422785 LDHAL6AQ6ZMR3 332 aa16.4■□□□□ 0.22
CDCA3-202ENST00000422785 MAST3O60307 1309 aa16.4■□□□□ 0.22
CDCA3-202ENST00000422785 PDE8AO60658 829 aa16.4■□□□□ 0.22
CDCA3-202ENST00000422785 EIF5P55010 431 aaKnown RBP16.4■□□□□ 0.22
CDCA3-202ENST00000422785 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDCA3-202ENST00000422785 SLFNL1Q499Z3 407 aa16.4■□□□□ 0.22
CDCA3-202ENST00000422785 GDPD2Q9HCC8 539 aa16.4■□□□□ 0.22
CDCA3-202ENST00000422785 TCHHQ07283 1943 aa16.4■□□□□ 0.22
CDCA3-202ENST00000422785 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
CDCA3-202ENST00000422785 NASPP49321 788 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-202ENST00000422785 METTL24Q5JXM2 366 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-202ENST00000422785 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
CDCA3-202ENST00000422785 PDCP20941 246 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 MARCH10Q8NA82 808 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-202ENST00000422785 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
CDCA3-202ENST00000422785 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 UBN2Q6ZU65 1347 aa16.39■□□□□ 0.21
CDCA3-202ENST00000422785 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
CDCA3-202ENST00000422785 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
CDCA3-202ENST00000422785 LRSAM1Q6UWE0 723 aa16.38■□□□□ 0.21
CDCA3-202ENST00000422785 AK7Q96M32 723 aa16.38■□□□□ 0.21
CDCA3-202ENST00000422785 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
CDCA3-202ENST00000422785 LARP1BQ659C4 914 aaKnown RBP16.38■□□□□ 0.21
CDCA3-202ENST00000422785 Q6ZUG5 572 aa16.38■□□□□ 0.21
CDCA3-202ENST00000422785 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
CDCA3-202ENST00000422785 CNNM1Q9NRU3 951 aa16.38■□□□□ 0.21
CDCA3-202ENST00000422785 M0R2C6 588 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 SCARF1Q14162 830 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 VGLL2Q8N8G2 317 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 ZNF512BQ96KM6 892 aaPredicted RBP16.37■□□□□ 0.21
CDCA3-202ENST00000422785 SYCE3A1L190 88 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 DHX32Q7L7V1 743 aaKnown RBP16.37■□□□□ 0.21
CDCA3-202ENST00000422785 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
CDCA3-202ENST00000422785 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-202ENST00000422785 DTNBO60941 627 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
CDCA3-202ENST00000422785 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
CDCA3-202ENST00000422785 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms