RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-213ENST00000421756 IL2RBP14784 551 aa15.8■□□□□ 0.12
MCF2L-213ENST00000421756 HLFQ16534 295 aa15.8■□□□□ 0.12
MCF2L-213ENST00000421756 ISM2Q6H9L7 571 aa15.8■□□□□ 0.12
MCF2L-213ENST00000421756 ATP5JP18859 108 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 METTL24Q5JXM2 366 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 SLAIN2Q9P270 581 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 NUTM2BA6NNL0 878 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-213ENST00000421756 NUTM2EB1AL46 878 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-213ENST00000421756 FOXO4P98177 505 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 LDHAL6AQ6ZMR3 332 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 NUTM2AQ8IVF1 878 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-213ENST00000421756 TNMDQ9H2S6 317 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 ZAP70P43403 619 aa15.79■□□□□ 0.12
MCF2L-213ENST00000421756 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-213ENST00000421756 SCRN1Q12765 414 aa15.78■□□□□ 0.12
MCF2L-213ENST00000421756 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.78■□□□□ 0.12
MCF2L-213ENST00000421756 ATG9AQ7Z3C6 839 aa15.78■□□□□ 0.12
MCF2L-213ENST00000421756 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 NR1I2O75469 434 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 SPATA31A3Q5VYP0 1347 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 M0R2C6 588 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 LRP10Q7Z4F1 713 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 ZNF609O15014 1411 aa15.77■□□□□ 0.12
MCF2L-213ENST00000421756 EYA2O00167 538 aa15.77■□□□□ 0.11
MCF2L-213ENST00000421756 RRP12Q5JTH9 1297 aaKnown RBP15.77■□□□□ 0.11
MCF2L-213ENST00000421756 KBTBD3Q8NAB2 608 aa15.77■□□□□ 0.11
MCF2L-213ENST00000421756 OSBP2Q969R2 916 aa15.77■□□□□ 0.11
MCF2L-213ENST00000421756 TRMT112Q9UI30 125 aaKnown RBP15.77■□□□□ 0.11
MCF2L-213ENST00000421756 CCDC24Q8N4L8 307 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 XAGE2Q96GT9 111 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 IFIT5Q13325 482 aaKnown RBP15.76■□□□□ 0.11
MCF2L-213ENST00000421756 CCDC158Q5M9N0 1113 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 DNAJC25Q9H1X3 360 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 CCDC39Q9UFE4 941 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 RGPD5Q99666 1765 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 AP5Z1O43299 807 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 HSPD1P10809 573 aaKnown RBP15.76■□□□□ 0.11
MCF2L-213ENST00000421756 ATP2B1P20020 1258 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 ME1P48163 572 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 KIF6Q6ZMV9 814 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 PIGBQ92521 554 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 HAUS7Q99871 368 aa15.76■□□□□ 0.11
MCF2L-213ENST00000421756 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 SLC4A8Q2Y0W8 1093 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 ANO6Q4KMQ2 910 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 BICDL1Q6ZP65 573 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 MYL10Q9BUA6 226 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 GREM2Q9H772 168 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 USP42Q9H9J4 1324 aaKnown RBP15.75■□□□□ 0.11
MCF2L-213ENST00000421756 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
MCF2L-213ENST00000421756 NOL7Q9UMY1 257 aaKnown RBP15.75■□□□□ 0.11
MCF2L-213ENST00000421756 BIN1O00499 593 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 TRIM5Q9C035 493 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 PUS7LQ9H0K6 701 aaKnown RBP15.74■□□□□ 0.11
MCF2L-213ENST00000421756 UQCRHLA0A096LP55 91 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 UQCRHP07919 91 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 ANKRD1Q15327 319 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 MAP3K11Q16584 847 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 LEO1Q8WVC0 666 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-213ENST00000421756 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-213ENST00000421756 E7EWF7 191 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 PDCP20941 246 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
MCF2L-213ENST00000421756 MAST3O60307 1309 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
MCF2L-213ENST00000421756 H7C1W4 665 aa15.73■□□□□ 0.11
MCF2L-213ENST00000421756 CPLX1O14810 134 aa15.73■□□□□ 0.11
MCF2L-213ENST00000421756 IL15P40933 162 aaPredicted RBP15.73■□□□□ 0.11
MCF2L-213ENST00000421756 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
MCF2L-213ENST00000421756 CCDC192P0DO97 292 aa15.73■□□□□ 0.11
MCF2L-213ENST00000421756 UTYO14607 1347 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 ITGA6P23229 1130 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 GTF3C6Q969F1 213 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 AIFM3Q96NN9 605 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 NRBP1Q9UHY1 535 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 WDR17Q8IZU2 1322 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 SLC9C2Q5TAH2 1124 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 CASP7P55210 303 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 CSPP1Q1MSJ5 1256 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 SASS6Q6UVJ0 657 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 ZKSCAN3Q9BRR0 538 aa15.72■□□□□ 0.11
MCF2L-213ENST00000421756 MARF1Q9Y4F3 1742 aaKnown RBP15.72■□□□□ 0.11
MCF2L-213ENST00000421756 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
MCF2L-213ENST00000421756 TYRO3Q06418 890 aa15.71■□□□□ 0.11
MCF2L-213ENST00000421756 DHX32Q7L7V1 743 aaKnown RBP15.71■□□□□ 0.11
MCF2L-213ENST00000421756 RALYLQ86SE5 291 aaKnown RBP15.71■□□□□ 0.11
MCF2L-213ENST00000421756 PDLIM2Q96JY6 352 aa15.71■□□□□ 0.11
MCF2L-213ENST00000421756 JAG2Q9Y219 1238 aa15.71■□□□□ 0.11
MCF2L-213ENST00000421756 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
MCF2L-213ENST00000421756 LRMPQ12912 555 aa15.71■□□□□ 0.11
MCF2L-213ENST00000421756 MICU3Q86XE3 530 aa15.71■□□□□ 0.11
MCF2L-213ENST00000421756 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms