RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 PAG1Q9NWQ8 432 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 STAP2Q9UGK3 403 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 LRRC37A3O60309 1634 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 ABCA3Q99758 1704 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 PDE8BO95263 885 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 MMP10P09238 476 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 NACAP1Q9BZK3 213 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 SCN11AQ9UI33 1791 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 ATP5JP18859 108 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 CDK11BP21127 795 aaKnown RBP8.89□□□□□ -0.99
BDNF-209ENST00000420794 SMIM5Q71RC9 77 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 PUS3Q9BZE2 481 aaKnown RBP8.89□□□□□ -0.99
BDNF-209ENST00000420794 CTNNA3Q9UI47 895 aa8.89□□□□□ -0.99
BDNF-209ENST00000420794 C8orf34Q49A92 452 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 LRP10Q7Z4F1 713 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 ZNF804AQ7Z570 1209 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 SEC31BQ9NQW1 1179 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 TAF5LO75529 589 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 SASH1O94885 1247 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 NTSR2O95665 410 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 RABEP1Q15276 862 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 SPTY2D1Q68D10 685 aaPredicted RBP8.88□□□□□ -0.99
BDNF-209ENST00000420794 TMC4Q7Z404 712 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 CHMP4CQ96CF2 233 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
BDNF-209ENST00000420794 CSF1RP07333 972 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 ZGPATQ8N5A5 531 aaKnown RBP8.88□□□□□ -0.99
BDNF-209ENST00000420794 EYA3Q99504 573 aa8.88□□□□□ -0.99
BDNF-209ENST00000420794 ZNF219Q9P2Y4 722 aaPredicted RBP8.88□□□□□ -0.99
BDNF-209ENST00000420794 BBOX1O75936 387 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 EZH2Q15910 746 aaKnown RBP8.87□□□□□ -0.99
BDNF-209ENST00000420794 CACNA1FO60840 1977 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 CHRNDQ07001 517 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 RALYLQ86SE5 291 aaKnown RBP8.87□□□□□ -0.99
BDNF-209ENST00000420794 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 UBN2Q6ZU65 1347 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 UBE4AQ14139 1066 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 SLC15A2Q16348 729 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 DZIP1Q86YF9 867 aaKnown RBP8.87□□□□□ -0.99
BDNF-209ENST00000420794 ESYT1Q9BSJ8 1104 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
BDNF-209ENST00000420794 KCPQ6ZWJ8 1503 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 CRYBG1Q9Y4K1 1723 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 HIBADHP31937 336 aaKnown RBP8.87□□□□□ -0.99
BDNF-209ENST00000420794 SF3B3Q15393 1217 aaKnown RBP8.87□□□□□ -0.99
BDNF-209ENST00000420794 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 DENND2AQ9ULE3 1009 aa8.87□□□□□ -0.99
BDNF-209ENST00000420794 CHMLP26374 656 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 SPRYD3Q8NCJ5 442 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 CNKSR1Q969H4 720 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 LRRC4BQ9NT99 713 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 UFL1O94874 794 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 LDHCP07864 332 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 MCM2P49736 904 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 GRAPQ13588 217 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 KRT32Q14532 448 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 C2CD5Q86YS7 1000 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 GRAPLQ8TC17 118 aaPredicted RBP8.86□□□□□ -0.99
BDNF-209ENST00000420794 KAZALD1Q96I82 304 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 DBNLQ9UJU6 430 aaKnown RBP8.86□□□□□ -0.99
BDNF-209ENST00000420794 KDM3BQ7LBC6 1761 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 GYS1P13807 737 aa8.86□□□□□ -0.99
BDNF-209ENST00000420794 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
BDNF-209ENST00000420794 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
BDNF-209ENST00000420794 NEK4P51957 841 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 MCMDC2Q4G0Z9 681 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 KBTBD3Q8NAB2 608 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
BDNF-209ENST00000420794 RAD50Q92878 1312 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 GOLGA6L22H0YM25 854 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 SLC3A2P08195 630 aaKnown RBP8.85□□□□□ -0.99
BDNF-209ENST00000420794 GSPT1P15170 499 aaKnown RBP8.85□□□□□ -0.99
BDNF-209ENST00000420794 ATP2B4P23634 1241 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 CASP7P55210 303 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 SLC9C2Q5TAH2 1124 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 DEFB132Q7Z7B7 95 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 BRIP1Q9BX63 1249 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 LEMD3Q9Y2U8 911 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 RNF113AO15541 343 aaKnown RBP8.85□□□□□ -0.99
BDNF-209ENST00000420794 NPR1P16066 1061 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 PRR5LQ6MZQ0 368 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 DPP8Q6V1X1 898 aaPredicted RBP8.85□□□□□ -0.99
BDNF-209ENST00000420794 SLC16A10Q8TF71 515 aa8.85□□□□□ -0.99
BDNF-209ENST00000420794 ANO8Q9HCE9 1232 aaPredicted RBP8.85□□□□□ -0.99
BDNF-209ENST00000420794 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
BDNF-209ENST00000420794 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
BDNF-209ENST00000420794 MPNDQ8N594 471 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 XDHP47989 1333 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 TDO2P48775 406 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 GSTO1P78417 241 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 SYNE3Q6ZMZ3 975 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
BDNF-209ENST00000420794 TBC1D32Q96NH3 1257 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 HAUS7Q99871 368 aa8.84□□□□□ -0.99
BDNF-209ENST00000420794 CYP46A1Q9Y6A2 500 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms