RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 EYA3Q99504 573 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 UTP14AQ9BVJ6 771 aaKnown RBP12.1□□□□□ -0.47
TRIM39-206ENST00000420746 KDM3BQ7LBC6 1761 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
TRIM39-206ENST00000420746 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-206ENST00000420746 GPR153Q6NV75 609 aa12.09□□□□□ -0.47
TRIM39-206ENST00000420746 TTLL7Q6ZT98 887 aa12.09□□□□□ -0.47
TRIM39-206ENST00000420746 COL25A1Q9BXS0 654 aaPredicted RBP12.09□□□□□ -0.47
TRIM39-206ENST00000420746 ANKRD36CQ5JPF3 1778 aa12.09□□□□□ -0.47
TRIM39-206ENST00000420746 ARHGEF6Q15052 776 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 SLC4A8Q2Y0W8 1093 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 CD99L2Q8TCZ2 262 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 POLR3GLQ9BT43 218 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
TRIM39-206ENST00000420746 ZBTB48P10074 688 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-206ENST00000420746 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
TRIM39-206ENST00000420746 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
TRIM39-206ENST00000420746 ARMC9Q7Z3E5 817 aa12.07□□□□□ -0.48
TRIM39-206ENST00000420746 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
TRIM39-206ENST00000420746 MYOZ2Q9NPC6 264 aa12.07□□□□□ -0.48
TRIM39-206ENST00000420746 KCNQ5Q9NR82 932 aa12.07□□□□□ -0.48
TRIM39-206ENST00000420746 STXBP5LQ9Y2K9 1186 aa12.07□□□□□ -0.48
TRIM39-206ENST00000420746 LAMB1P07942 1786 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 SP3Q02447 781 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-206ENST00000420746 OTUD7BQ6GQQ9 843 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-206ENST00000420746 NGEFQ8N5V2 710 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 DPF3Q92784 378 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 GMLQ99445 158 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 POLLQ9UGP5 575 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
TRIM39-206ENST00000420746 COL3A1P02461 1466 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-206ENST00000420746 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
TRIM39-206ENST00000420746 UNCXA6NJT0 531 aa12.05□□□□□ -0.48
TRIM39-206ENST00000420746 C6orf229H3BNL8 230 aa12.05□□□□□ -0.48
TRIM39-206ENST00000420746 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIM39-206ENST00000420746 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
TRIM39-206ENST00000420746 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
TRIM39-206ENST00000420746 HTATIP2Q9BUP3 242 aa12.05□□□□□ -0.48
TRIM39-206ENST00000420746 NR2E3Q9Y5X4 410 aa12.05□□□□□ -0.48
TRIM39-206ENST00000420746 SOX1O00570 391 aaPredicted RBP12.04□□□□□ -0.48
TRIM39-206ENST00000420746 CRHR2Q13324 411 aa12.04□□□□□ -0.48
TRIM39-206ENST00000420746 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
TRIM39-206ENST00000420746 RTF1Q92541 710 aaKnown RBP12.04□□□□□ -0.48
TRIM39-206ENST00000420746 PTCH2Q9Y6C5 1203 aa12.04□□□□□ -0.48
TRIM39-206ENST00000420746 LAMB2P55268 1798 aa12.04□□□□□ -0.48
TRIM39-206ENST00000420746 HTATSF1O43719 755 aaKnown RBP12.03□□□□□ -0.48
TRIM39-206ENST00000420746 MMP14P50281 582 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 MAP3K11Q16584 847 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 TBC1D16Q8TBP0 767 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 LRCH3Q96II8 777 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 ZC3H12CQ9C0D7 883 aaKnown RBP12.03□□□□□ -0.48
TRIM39-206ENST00000420746 RRP7AQ9Y3A4 280 aaKnown RBP12.03□□□□□ -0.48
TRIM39-206ENST00000420746 SCN9AQ15858 1988 aa12.03□□□□□ -0.48
TRIM39-206ENST00000420746 U2SURPO15042 1029 aaKnown RBP12.02□□□□□ -0.49
TRIM39-206ENST00000420746 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-206ENST00000420746 HCLS1P14317 486 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-206ENST00000420746 GPSM2P81274 684 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 CAP1Q01518 475 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 MCM10Q7L590 875 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 PODXL2Q9NZ53 605 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
TRIM39-206ENST00000420746 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-206ENST00000420746 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-206ENST00000420746 MYL6BP14649 208 aa12.01□□□□□ -0.49
TRIM39-206ENST00000420746 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-206ENST00000420746 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
TRIM39-206ENST00000420746 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
TRIM39-206ENST00000420746 WNK4Q96J92 1243 aa12.01□□□□□ -0.49
TRIM39-206ENST00000420746 PRDM6Q9NQX0 595 aa12.01□□□□□ -0.49
TRIM39-206ENST00000420746 WTIPA6NIX2 430 aaPredicted RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 G3V3G9 751 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 PRKAR2BP31323 418 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 NBPF9Q3BBW0 867 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 NLRP10Q86W26 655 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 APOBEC3FQ8IUX4 373 aaKnown RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 PHF6Q8IWS0 365 aaKnown RBP eCLIP12□□□□□ -0.49
TRIM39-206ENST00000420746 DEFB123Q8N688 67 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 ANGEL1Q9UNK9 670 aaKnown RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 SCAF8Q9UPN6 1271 aaKnown RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 VCANP13611 3396 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 ZNF646O15015 1829 aaPredicted RBP12□□□□□ -0.49
TRIM39-206ENST00000420746 PSME4Q14997 1843 aa12□□□□□ -0.49
TRIM39-206ENST00000420746 WNT10BO00744 389 aa11.99□□□□□ -0.49
TRIM39-206ENST00000420746 GNRH1P01148 92 aa11.99□□□□□ -0.49
TRIM39-206ENST00000420746 PRMT2P55345 433 aa11.99□□□□□ -0.49
TRIM39-206ENST00000420746 LRP10Q7Z4F1 713 aa11.99□□□□□ -0.49
TRIM39-206ENST00000420746 PODNQ7Z5L7 613 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms