RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 MBD3O95983 291 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 ZSCAN22P10073 491 aaPredicted RBP24.73■■□□□ 1.55
FAM3A-208ENST00000419205 CTSWP56202 376 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 CCDC129Q6ZRS4 1044 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 DZIP3Q86Y13 1208 aaKnown RBP24.73■■□□□ 1.55
FAM3A-208ENST00000419205 CHAMP1Q96JM3 812 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 TPCN1Q9ULQ1 816 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 SPATA31A5Q5VU36 1347 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 SPATA31A7Q8IWB4 1347 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 ABCC12Q96J65 1359 aa24.73■■□□□ 1.55
FAM3A-208ENST00000419205 STX6O43752 255 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 CHGBP05060 677 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 SYT1P21579 422 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 ST3GAL1Q11201 340 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 CCDC158Q5M9N0 1113 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 CAVIN1Q6NZI2 390 aaKnown RBP24.72■■□□□ 1.55
FAM3A-208ENST00000419205 SLIT2O94813 1529 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 DSCC1Q9BVC3 393 aa24.72■■□□□ 1.55
FAM3A-208ENST00000419205 IRS4O14654 1257 aaPredicted RBP24.71■■□□□ 1.55
FAM3A-208ENST00000419205 NCLP19338 710 aaKnown RBP24.71■■□□□ 1.55
FAM3A-208ENST00000419205 BARGINQ6ZT62 677 aa24.71■■□□□ 1.55
FAM3A-208ENST00000419205 ZNF34Q8IZ26 560 aa24.71■■□□□ 1.55
FAM3A-208ENST00000419205 SYNE4Q8N205 404 aa24.71■■□□□ 1.55
FAM3A-208ENST00000419205 XAGE2Q96GT9 111 aa24.71■■□□□ 1.55
FAM3A-208ENST00000419205 RIPOR2Q9Y4F9 1068 aa24.71■■□□□ 1.55
FAM3A-208ENST00000419205 LRP5O75197 1615 aa24.71■■□□□ 1.55
FAM3A-208ENST00000419205 RNF113AO15541 343 aaKnown RBP24.7■■□□□ 1.55
FAM3A-208ENST00000419205 PDIA4P13667 645 aaKnown RBP24.7■■□□□ 1.55
FAM3A-208ENST00000419205 GJB2P29033 226 aa24.7■■□□□ 1.55
FAM3A-208ENST00000419205 EIF5P55010 431 aaKnown RBP24.7■■□□□ 1.55
FAM3A-208ENST00000419205 ZSCAN23Q3MJ62 389 aa24.7■■□□□ 1.55
FAM3A-208ENST00000419205 PANK2Q9BZ23 570 aa24.7■■□□□ 1.55
FAM3A-208ENST00000419205 ANKRD18BA2A2Z9 1011 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 PDE8AO60658 829 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 ITGA6P23229 1130 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 COL9A3Q14050 684 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-208ENST00000419205 TOB2Q14106 344 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-208ENST00000419205 LRRFIP1Q32MZ4 808 aaKnown RBP24.7■■□□□ 1.54
FAM3A-208ENST00000419205 TTC39AQ5SRH9 613 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 MARCH10Q8NA82 808 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-208ENST00000419205 TMEM87AQ8NBN3 555 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 CCDC85AQ96PX6 553 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-208ENST00000419205 NEK1Q96PY6 1258 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 GREM2Q9H772 168 aa24.7■■□□□ 1.54
FAM3A-208ENST00000419205 TRMT112Q9UI30 125 aaKnown RBP24.7■■□□□ 1.54
FAM3A-208ENST00000419205 LAMA4Q16363 1823 aa24.69■■□□□ 1.54
FAM3A-208ENST00000419205 CYP21A2P08686 494 aa24.69■■□□□ 1.54
FAM3A-208ENST00000419205 ADORA1P30542 326 aa24.69■■□□□ 1.54
FAM3A-208ENST00000419205 AK7Q96M32 723 aa24.69■■□□□ 1.54
FAM3A-208ENST00000419205 CCDC87Q9NVE4 849 aa24.69■■□□□ 1.54
FAM3A-208ENST00000419205 UBN2Q6ZU65 1347 aa24.68■■□□□ 1.54
FAM3A-208ENST00000419205 GORABQ5T7V8 394 aa24.68■■□□□ 1.54
FAM3A-208ENST00000419205 INTS5Q6P9B9 1019 aaKnown RBP24.68■■□□□ 1.54
FAM3A-208ENST00000419205 TBC1D2BQ9UPU7 963 aa24.68■■□□□ 1.54
FAM3A-208ENST00000419205 MYH7P12883 1935 aa24.68■■□□□ 1.54
FAM3A-208ENST00000419205 F13A1P00488 732 aa24.67■■□□□ 1.54
FAM3A-208ENST00000419205 ATP6V1DQ9Y5K8 247 aa24.67■■□□□ 1.54
FAM3A-208ENST00000419205 TCHHQ07283 1943 aa24.67■■□□□ 1.54
FAM3A-208ENST00000419205 MAST3O60307 1309 aa24.67■■□□□ 1.54
FAM3A-208ENST00000419205 ATP2B3Q16720 1220 aa24.67■■□□□ 1.54
FAM3A-208ENST00000419205 LDHAL6AQ6ZMR3 332 aa24.67■■□□□ 1.54
FAM3A-208ENST00000419205 ZNF831Q5JPB2 1677 aa24.66■■□□□ 1.54
FAM3A-208ENST00000419205 ZFYP08048 801 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-208ENST00000419205 METTL24Q5JXM2 366 aa24.66■■□□□ 1.54
FAM3A-208ENST00000419205 NECAB1Q8N987 351 aa24.66■■□□□ 1.54
FAM3A-208ENST00000419205 HMGB1P09429 215 aaKnown RBP24.65■■□□□ 1.54
FAM3A-208ENST00000419205 MTMR6Q9Y217 621 aa24.65■■□□□ 1.54
FAM3A-208ENST00000419205 ARAP2Q8WZ64 1704 aa24.65■■□□□ 1.54
FAM3A-208ENST00000419205 LOC102724428A0A0B4J2F2 783 aa24.65■■□□□ 1.54
FAM3A-208ENST00000419205 CRKLP46109 303 aaKnown RBP24.65■■□□□ 1.54
FAM3A-208ENST00000419205 SIK1P57059 783 aa24.65■■□□□ 1.54
FAM3A-208ENST00000419205 VGLL2Q8N8G2 317 aa24.65■■□□□ 1.54
FAM3A-208ENST00000419205 ZNF512BQ96KM6 892 aaPredicted RBP24.65■■□□□ 1.54
FAM3A-208ENST00000419205 TCEANC2Q96MN5 208 aa24.65■■□□□ 1.54
FAM3A-208ENST00000419205 AKAP11Q9UKA4 1901 aa24.64■■□□□ 1.54
FAM3A-208ENST00000419205 COL5A3P25940 1745 aaPredicted RBP24.64■■□□□ 1.54
FAM3A-208ENST00000419205 ATP6V1AP38606 617 aa24.64■■□□□ 1.53
FAM3A-208ENST00000419205 FKBP4Q02790 459 aaKnown RBP eCLIP24.64■■□□□ 1.53
FAM3A-208ENST00000419205 ACSBG1Q96GR2 724 aa24.64■■□□□ 1.53
FAM3A-208ENST00000419205 TMEM63CQ9P1W3 806 aa24.64■■□□□ 1.53
FAM3A-208ENST00000419205 NSFL1CQ9UNZ2 370 aaKnown RBP24.64■■□□□ 1.53
FAM3A-208ENST00000419205 LAMB2P55268 1798 aa24.64■■□□□ 1.53
FAM3A-208ENST00000419205 NUTM2BA6NNL0 878 aaPredicted RBP24.63■■□□□ 1.53
FAM3A-208ENST00000419205 NUTM2EB1AL46 878 aaPredicted RBP24.63■■□□□ 1.53
FAM3A-208ENST00000419205 HSPD1P10809 573 aaKnown RBP24.63■■□□□ 1.53
FAM3A-208ENST00000419205 SLFNL1Q499Z3 407 aa24.63■■□□□ 1.53
FAM3A-208ENST00000419205 USP48Q86UV5 1035 aa24.63■■□□□ 1.53
FAM3A-208ENST00000419205 NUTM2AQ8IVF1 878 aaPredicted RBP24.63■■□□□ 1.53
FAM3A-208ENST00000419205 CNNM1Q9NRU3 951 aa24.63■■□□□ 1.53
FAM3A-208ENST00000419205 RBM27Q9P2N5 1060 aaKnown RBP24.63■■□□□ 1.53
FAM3A-208ENST00000419205 MYH14Q7Z406 1995 aaKnown RBP24.63■■□□□ 1.53
FAM3A-208ENST00000419205 TOM1O60784 492 aa24.62■■□□□ 1.53
FAM3A-208ENST00000419205 PDCP20941 246 aa24.62■■□□□ 1.53
FAM3A-208ENST00000419205 DDX60Q8IY21 1712 aaKnown RBP24.61■■□□□ 1.53
FAM3A-208ENST00000419205 M0R2C6 588 aa24.61■■□□□ 1.53
FAM3A-208ENST00000419205 ITPK1Q13572 414 aa24.61■■□□□ 1.53
FAM3A-208ENST00000419205 SCARF1Q14162 830 aa24.61■■□□□ 1.53
FAM3A-208ENST00000419205 STOX1Q6ZVD7 989 aa24.61■■□□□ 1.53
FAM3A-208ENST00000419205 SMARCC1Q92922 1105 aaPredicted RBP24.61■■□□□ 1.53
FAM3A-208ENST00000419205 BCORQ6W2J9 1755 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms