RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHMP5-202ENST00000419016 MPHOSPH8Q99549 860 aa16.89■□□□□ 0.29
CHMP5-202ENST00000419016 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
CHMP5-202ENST00000419016 BSDC1Q9NW68 430 aaPredicted RBP16.89■□□□□ 0.29
CHMP5-202ENST00000419016 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
CHMP5-202ENST00000419016 A0A1B0GUL7 405 aa16.88■□□□□ 0.29
CHMP5-202ENST00000419016 NPHP1O15259 732 aa16.88■□□□□ 0.29
CHMP5-202ENST00000419016 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
CHMP5-202ENST00000419016 CELF1Q92879 486 aaKnown RBP16.88■□□□□ 0.29
CHMP5-202ENST00000419016 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
CHMP5-202ENST00000419016 PDGFDQ9GZP0 370 aaPredicted RBP16.88■□□□□ 0.29
CHMP5-202ENST00000419016 ERC2O15083 957 aa16.88■□□□□ 0.29
CHMP5-202ENST00000419016 FGFR2P21802 821 aa16.88■□□□□ 0.29
CHMP5-202ENST00000419016 SEC24BO95487 1268 aa16.87■□□□□ 0.29
CHMP5-202ENST00000419016 ATP5JP18859 108 aa16.87■□□□□ 0.29
CHMP5-202ENST00000419016 RPS8P62241 208 aaKnown RBP16.87■□□□□ 0.29
CHMP5-202ENST00000419016 MSL1Q68DK7 614 aa16.87■□□□□ 0.29
CHMP5-202ENST00000419016 BRIP1Q9BX63 1249 aa16.87■□□□□ 0.29
CHMP5-202ENST00000419016 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
CHMP5-202ENST00000419016 PARP3Q9Y6F1 533 aa16.86■□□□□ 0.29
CHMP5-202ENST00000419016 TAF1P21675 1872 aa16.86■□□□□ 0.29
CHMP5-202ENST00000419016 ATP2B3Q16720 1220 aa16.86■□□□□ 0.29
CHMP5-202ENST00000419016 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
CHMP5-202ENST00000419016 DDX46Q7L014 1031 aaKnown RBP16.86■□□□□ 0.29
CHMP5-202ENST00000419016 CDC45O75419 566 aa16.85■□□□□ 0.29
CHMP5-202ENST00000419016 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
CHMP5-202ENST00000419016 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
CHMP5-202ENST00000419016 MINPP1Q9UNW1 487 aa16.85■□□□□ 0.29
CHMP5-202ENST00000419016 ANKRD31Q8N7Z5 1873 aa16.84■□□□□ 0.29
CHMP5-202ENST00000419016 CHRNDQ07001 517 aa16.84■□□□□ 0.29
CHMP5-202ENST00000419016 GRAPQ13588 217 aa16.84■□□□□ 0.29
CHMP5-202ENST00000419016 HELBQ8NG08 1087 aaPredicted RBP16.84■□□□□ 0.29
CHMP5-202ENST00000419016 GRAPLQ8TC17 118 aaPredicted RBP16.84■□□□□ 0.29
CHMP5-202ENST00000419016 XAGE2Q96GT9 111 aa16.84■□□□□ 0.29
CHMP5-202ENST00000419016 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
CHMP5-202ENST00000419016 ADORA1P30542 326 aa16.84■□□□□ 0.29
CHMP5-202ENST00000419016 PUM3Q15397 648 aaKnown RBP16.84■□□□□ 0.29
CHMP5-202ENST00000419016 LPIN2Q92539 896 aa16.84■□□□□ 0.29
CHMP5-202ENST00000419016 SPEF2Q9C093 1822 aa16.83■□□□□ 0.29
CHMP5-202ENST00000419016 TAF5LO75529 589 aa16.82■□□□□ 0.28
CHMP5-202ENST00000419016 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHMP5-202ENST00000419016 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
CHMP5-202ENST00000419016 BOLA2Q9H3K6 86 aa16.82■□□□□ 0.28
CHMP5-202ENST00000419016 TRIM6-TRIM34B2RNG4 842 aa16.82■□□□□ 0.28
CHMP5-202ENST00000419016 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
CHMP5-202ENST00000419016 HAUS7Q99871 368 aa16.82■□□□□ 0.28
CHMP5-202ENST00000419016 SNAP23O00161 211 aa16.81■□□□□ 0.28
CHMP5-202ENST00000419016 MAP4K4O95819 1239 aaPredicted RBP16.81■□□□□ 0.28
CHMP5-202ENST00000419016 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
CHMP5-202ENST00000419016 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
CHMP5-202ENST00000419016 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
CHMP5-202ENST00000419016 A0A1B0GUL6 1792 aa16.81■□□□□ 0.28
CHMP5-202ENST00000419016 SRGNP10124 158 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 CNTROBQ8N137 903 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 ARAP2Q8WZ64 1704 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 CHMLP26374 656 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 PDE6BP35913 854 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 UBE4AQ14139 1066 aa16.8■□□□□ 0.28
CHMP5-202ENST00000419016 BBOX1O75936 387 aa16.79■□□□□ 0.28
CHMP5-202ENST00000419016 WTIPA6NIX2 430 aaPredicted RBP16.78■□□□□ 0.28
CHMP5-202ENST00000419016 SLC5A1P13866 664 aa16.78■□□□□ 0.28
CHMP5-202ENST00000419016 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
CHMP5-202ENST00000419016 ANKRD2Q9GZV1 360 aa16.78■□□□□ 0.28
CHMP5-202ENST00000419016 NPR1P16066 1061 aa16.78■□□□□ 0.28
CHMP5-202ENST00000419016 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.28
CHMP5-202ENST00000419016 ARID4AP29374 1257 aaPredicted RBP16.77■□□□□ 0.28
CHMP5-202ENST00000419016 SCARF1Q14162 830 aa16.77■□□□□ 0.28
CHMP5-202ENST00000419016 GORABQ5T7V8 394 aa16.77■□□□□ 0.28
CHMP5-202ENST00000419016 CCDC102BQ68D86 513 aa16.77■□□□□ 0.28
CHMP5-202ENST00000419016 SLC51AQ86UW1 340 aa16.77■□□□□ 0.28
CHMP5-202ENST00000419016 EDC3Q96F86 508 aaKnown RBP16.77■□□□□ 0.28
CHMP5-202ENST00000419016 PHKA1P46020 1223 aa16.77■□□□□ 0.27
CHMP5-202ENST00000419016 TTC39AQ5SRH9 613 aa16.77■□□□□ 0.27
CHMP5-202ENST00000419016 NDUFB9Q9Y6M9 179 aa16.77■□□□□ 0.27
CHMP5-202ENST00000419016 COL11A2P13942 1736 aaPredicted RBP16.76■□□□□ 0.27
CHMP5-202ENST00000419016 IRS2Q9Y4H2 1338 aa16.76■□□□□ 0.27
CHMP5-202ENST00000419016 TMC4Q7Z404 712 aa16.76■□□□□ 0.27
CHMP5-202ENST00000419016 TICAM2Q86XR7 235 aa16.76■□□□□ 0.27
CHMP5-202ENST00000419016 MASTLQ96GX5 879 aa16.76■□□□□ 0.27
CHMP5-202ENST00000419016 ZNF804BA4D1E1 1349 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 ESYT1Q9BSJ8 1104 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 UQCRFS1P1P0C7P4 283 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 MCAMP43121 646 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 PAG1Q9NWQ8 432 aa16.75■□□□□ 0.27
CHMP5-202ENST00000419016 RFX7Q2KHR2 1363 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 AK9Q5TCS8 1911 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 AKAP11Q9UKA4 1901 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 ZBTB22O15209 634 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 ALDH1B1P30837 517 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
CHMP5-202ENST00000419016 KBTBD3Q8NAB2 608 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
CHMP5-202ENST00000419016 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
CHMP5-202ENST00000419016 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
CHMP5-202ENST00000419016 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
CHMP5-202ENST00000419016 BCAMP50895 628 aa16.73■□□□□ 0.27
CHMP5-202ENST00000419016 R3HDM1Q15032 1099 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms