RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SIK1P57059 783 aa8.35□□□□□ -1.07
HMGB1P49-201ENST00000418882 GRIK5Q16478 980 aa8.35□□□□□ -1.07
HMGB1P49-201ENST00000418882 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P49-201ENST00000418882 EREGO14944 169 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 NDUFB5O43674 189 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 KIF4AO95239 1232 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 NID1P14543 1247 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 EIF2AK2P19525 551 aaKnown RBP8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 COL8A1P27658 744 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 USP5P45974 858 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 ATP11AP98196 1134 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 JPH1Q9HDC5 661 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P49-201ENST00000418882 IRS1P35568 1242 aa8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 ORC1Q13415 861 aa8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 KCTD17Q8N5Z5 321 aa8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 MKL2Q9ULH7 1088 aa8.33□□□□□ -1.08
HMGB1P49-201ENST00000418882 TMC7Q7Z402 723 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 SNX29Q8TEQ0 813 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 PLD4Q96BZ4 506 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 SCARF2Q96GP6 870 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 RBCK1Q9BYM8 510 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 SALL4Q9UJQ4 1053 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 DCTN4Q9UJW0 460 aa8.32□□□□□ -1.08
HMGB1P49-201ENST00000418882 GNB5O14775 395 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 PHACTR2O75167 634 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 TRPA1O75762 1119 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 CES1P23141 567 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 MAPK1P28482 360 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 EHHADHQ08426 723 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 HYAL2Q12891 473 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 PCSK7Q16549 785 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 ELMSAN1Q6PJG2 1045 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 BEND7Q8N7W2 519 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 CEP120Q8N960 986 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 TTC16Q8NEE8 873 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 HHIPQ96QV1 700 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 FRRS1LQ9P0K9 344 aa8.31□□□□□ -1.08
HMGB1P49-201ENST00000418882 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 LILRB5O75023 590 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 RGS9O75916 674 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 KCNMA1Q12791 1236 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 PODNQ7Z5L7 613 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 NIF3L1Q9GZT8 377 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 TRIM33Q9UPN9 1127 aa8.3□□□□□ -1.08
HMGB1P49-201ENST00000418882 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
HMGB1P49-201ENST00000418882 BAG6P46379 1132 aa8.29□□□□□ -1.08
HMGB1P49-201ENST00000418882 CITED4Q96RK1 184 aa8.29□□□□□ -1.08
HMGB1P49-201ENST00000418882 PLVAPQ9BX97 442 aa8.29□□□□□ -1.08
HMGB1P49-201ENST00000418882 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 NFKBIEO00221 500 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 GHRHP01286 108 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 RASSF7Q02833 373 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 NCAPG2Q86XI2 1143 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 TTC9Q92623 222 aa8.28□□□□□ -1.08
HMGB1P49-201ENST00000418882 PDE3BQ13370 1112 aa8.27□□□□□ -1.09
HMGB1P49-201ENST00000418882 DSC3Q14574 896 aa8.27□□□□□ -1.09
HMGB1P49-201ENST00000418882 DZANK1Q9NVP4 752 aa8.27□□□□□ -1.09
HMGB1P49-201ENST00000418882 GDF6Q6KF10 455 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P49-201ENST00000418882 ALKBH8Q96BT7 664 aaKnown RBP8.26□□□□□ -1.09
HMGB1P49-201ENST00000418882 ZKSCAN3Q9BRR0 538 aa8.26□□□□□ -1.09
HMGB1P49-201ENST00000418882 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P49-201ENST00000418882 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
HMGB1P49-201ENST00000418882 RNF225M0QZC1 329 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 TREHO43280 583 aa8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 ITGB2P05107 769 aa8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 CEP135Q66GS9 1140 aa8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 DMRTC2Q8IXT2 367 aaPredicted RBP8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 DMRTB1Q96MA1 342 aa8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 POP1Q99575 1024 aaKnown RBP8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 PBX4Q9BYU1 374 aa8.25□□□□□ -1.09
HMGB1P49-201ENST00000418882 EIF1AYO14602 144 aaKnown RBP8.24□□□□□ -1.09
HMGB1P49-201ENST00000418882 MSL1Q68DK7 614 aa8.24□□□□□ -1.09
HMGB1P49-201ENST00000418882 ASB16Q96NS5 453 aa8.24□□□□□ -1.09
HMGB1P49-201ENST00000418882 SETDB2Q96T68 719 aa8.24□□□□□ -1.09
HMGB1P49-201ENST00000418882 LACRTQ9GZZ8 138 aa8.24□□□□□ -1.09
HMGB1P49-201ENST00000418882 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 GALNT12Q8IXK2 581 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 PMEPA1Q969W9 287 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 CSRNP1Q96S65 589 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 OSMRQ99650 979 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 RBSNQ9H1K0 784 aa8.23□□□□□ -1.09
HMGB1P49-201ENST00000418882 A0A0A0MRY4 1105 aa8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 CPNE3O75131 537 aaKnown RBP8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 DEAF1O75398 565 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms