RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
PTCH1-205ENST00000418258 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
PTCH1-205ENST00000418258 RNF187Q5TA31 235 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-205ENST00000418258 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-205ENST00000418258 GNAQP50148 359 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 MAATS1Q7Z4T9 603 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 DDX19AQ9NUU7 478 aaKnown RBP12.79□□□□□ -0.36
PTCH1-205ENST00000418258 TNRQ92752 1358 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-205ENST00000418258 SYKP43405 635 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 ALG1Q9BT22 464 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 AKNAD1Q5T1N1 836 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 MBIPQ9NS73 344 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
PTCH1-205ENST00000418258 CTR9Q6PD62 1173 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 GSDMDP57764 484 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 SP4Q02446 784 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 RAB3IL1Q8TBN0 382 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 RRP36Q96EU6 259 aaKnown RBP12.78□□□□□ -0.36
PTCH1-205ENST00000418258 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 TNNI2P48788 182 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 N4BP3O15049 544 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 KIF4AO95239 1232 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 GRM8O00222 908 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 SPAG5Q96R06 1193 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 LRRC2Q9BYS8 371 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
PTCH1-205ENST00000418258 GIMAP7Q8NHV1 300 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 TMEM110-MUSTN1A8MSY1 372 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 JAG2Q9Y219 1238 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 SLC9C2Q5TAH2 1124 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 TBC1D9Q6ZT07 1266 aa12.77□□□□□ -0.36
PTCH1-205ENST00000418258 C16orf45Q96MC5 204 aaPredicted RBP12.77□□□□□ -0.36
PTCH1-205ENST00000418258 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.36
PTCH1-205ENST00000418258 CABLES1Q8TDN4 633 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-205ENST00000418258 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 FAM13AO94988 1023 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 PLCG2P16885 1265 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 GJC1P36383 396 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.37
PTCH1-205ENST00000418258 DDX12PQ92771 950 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 PICK1Q9NRD5 415 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 NSD2O96028 1365 aa12.77□□□□□ -0.37
PTCH1-205ENST00000418258 CEP83Q9Y592 693 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
PTCH1-205ENST00000418258 IL2RBP14784 551 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 IQCGQ9H095 443 aaKnown RBP12.76□□□□□ -0.37
PTCH1-205ENST00000418258 MCMDC2Q4G0Z9 681 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 CCDC117Q8IWD4 279 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-205ENST00000418258 ARID5AQ03989 594 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 SELENOOQ9BVL4 669 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 TERF1P54274 439 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 MICALCLQ6ZW33 695 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
PTCH1-205ENST00000418258 BACH1O14867 736 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-205ENST00000418258 FBLN1P23142 703 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 ESPNB1AK53 854 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 AKR1B10O60218 316 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
PTCH1-205ENST00000418258 NDC80O14777 642 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 ASIC1P78348 528 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 ODF2LQ9ULJ1 636 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 SSFA2P28290 1259 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 NFATC2IPQ8NCF5 419 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 EYA3Q99504 573 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 BEGAINQ9BUH8 593 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 BMP15O95972 392 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 UBASH3AP57075 661 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 CCDC50Q8IVM0 306 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 USP25Q9UHP3 1055 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
PTCH1-205ENST00000418258 EHBP1Q8NDI1 1231 aa12.75□□□□□ -0.37
PTCH1-205ENST00000418258 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
PTCH1-205ENST00000418258 MIGA1Q8NAN2 632 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
PTCH1-205ENST00000418258 GOLGA6L9A6NEM1 432 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 CKAP4Q07065 602 aaKnown RBP12.74□□□□□ -0.37
PTCH1-205ENST00000418258 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
PTCH1-205ENST00000418258 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 CCDC63Q8NA47 563 aa12.74□□□□□ -0.37
PTCH1-205ENST00000418258 PAG1Q9NWQ8 432 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms