RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CHMP4BP1P59074 171 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 SLC52A2Q9HAB3 445 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 EPB41L2O43491 1005 aaKnown RBP15.29■□□□□ 0.04
BDNF-208ENST00000418212 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
BDNF-208ENST00000418212 ZKSCAN3Q9BRR0 538 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 USP44Q9H0E7 712 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
BDNF-208ENST00000418212 PICALMQ13492 652 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 ESR2Q92731 530 aa15.29■□□□□ 0.04
BDNF-208ENST00000418212 EYA2O00167 538 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 GNPATO15228 680 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 ZNF830Q96NB3 372 aaPredicted RBP15.28■□□□□ 0.04
BDNF-208ENST00000418212 FEZ1Q99689 392 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 C16orf45Q96MC5 204 aaPredicted RBP15.28■□□□□ 0.04
BDNF-208ENST00000418212 RNF113AO15541 343 aaKnown RBP15.28■□□□□ 0.04
BDNF-208ENST00000418212 PLCD3Q8N3E9 789 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 PLBD2Q8NHP8 589 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 CCDC171Q6TFL3 1326 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 CCP110O43303 1012 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
BDNF-208ENST00000418212 RBM25P49756 843 aaKnown RBP15.28■□□□□ 0.04
BDNF-208ENST00000418212 FBXO3Q9UK99 471 aa15.28■□□□□ 0.04
BDNF-208ENST00000418212 TAF5LO75529 589 aa15.27■□□□□ 0.04
BDNF-208ENST00000418212 F13A1P00488 732 aa15.27■□□□□ 0.04
BDNF-208ENST00000418212 ITGA6P23229 1130 aa15.27■□□□□ 0.04
BDNF-208ENST00000418212 KIF5BP33176 963 aa15.27■□□□□ 0.04
BDNF-208ENST00000418212 GCKRQ14397 625 aa15.27■□□□□ 0.04
BDNF-208ENST00000418212 IFIT1BQ5T764 474 aaKnown RBP15.27■□□□□ 0.04
BDNF-208ENST00000418212 TFCP2L1Q9NZI6 479 aa15.27■□□□□ 0.04
BDNF-208ENST00000418212 RTN1Q16799 776 aa15.27■□□□□ 0.03
BDNF-208ENST00000418212 SLF2Q8IX21 1173 aa15.27■□□□□ 0.03
BDNF-208ENST00000418212 SYT1P21579 422 aa15.27■□□□□ 0.03
BDNF-208ENST00000418212 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.03
BDNF-208ENST00000418212 TMX1Q9H3N1 280 aa15.27■□□□□ 0.03
BDNF-208ENST00000418212 LMTK3Q96Q04 1460 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 SPTY2D1Q68D10 685 aaPredicted RBP15.26■□□□□ 0.03
BDNF-208ENST00000418212 CCDC102BQ68D86 513 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
BDNF-208ENST00000418212 AFMP43652 599 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 DNA2P51530 1060 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 TNNI3KQ59H18 835 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 ZC3H12CQ9C0D7 883 aaKnown RBP15.26■□□□□ 0.03
BDNF-208ENST00000418212 FPGT-TNNI3KV9GXZ4 949 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 PTPN14Q15678 1187 aa15.26■□□□□ 0.03
BDNF-208ENST00000418212 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
BDNF-208ENST00000418212 CGNQ9P2M7 1197 aaKnown RBP15.26■□□□□ 0.03
BDNF-208ENST00000418212 CTAGE5O15320 804 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 TSPY3P0CV98 308 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 TSPY8P0CW00 308 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 SYKP43405 635 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 ST5P78524 1137 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 DHX32Q7L7V1 743 aaKnown RBP15.25■□□□□ 0.03
BDNF-208ENST00000418212 PRDM1O75626 825 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 CCDC181Q5TID7 509 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 TCP11L1Q9NUJ3 509 aa15.25■□□□□ 0.03
BDNF-208ENST00000418212 HOXB7P09629 217 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 AXDND1Q5T1B0 1012 aaPredicted RBP15.24■□□□□ 0.03
BDNF-208ENST00000418212 TMC6Q7Z403 805 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 KIAA1328Q86T90 577 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 NCOA5Q9HCD5 579 aaKnown RBP15.24■□□□□ 0.03
BDNF-208ENST00000418212 MBD4O95243 580 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 KRT23Q9C075 422 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 ZMYM4Q5VZL5 1548 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 PTPDC1A2A3K4 754 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 URI1O94763 535 aaPredicted RBP15.24■□□□□ 0.03
BDNF-208ENST00000418212 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
BDNF-208ENST00000418212 CCDC191Q8NCU4 936 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 RAB34Q9BZG1 259 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 DNAJC25Q9H1X3 360 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 LUC7LQ9NQ29 371 aaKnown RBP15.23■□□□□ 0.03
BDNF-208ENST00000418212 PRR36Q9H6K5 1346 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 MAGEB6P1A0A0J9YX57 407 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 SGSM2O43147 1006 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 IGSF3O75054 1194 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 SMAP1Q8IYB5 467 aaPredicted RBP15.23■□□□□ 0.03
BDNF-208ENST00000418212 B4E1Z4 1266 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 DYNC1I1O14576 645 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 RUFY3Q7L099 469 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 UBXN4Q92575 508 aa15.23■□□□□ 0.03
BDNF-208ENST00000418212 TMEM266Q2M3C6 531 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 ANO6Q4KMQ2 910 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 XAGE2Q96GT9 111 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 PLEKHF1Q96S99 279 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 OTUD7BQ6GQQ9 843 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 HEATR3Q7Z4Q2 680 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
BDNF-208ENST00000418212 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 MATR3P43243 847 aaKnown RBP eCLIP15.22■□□□□ 0.03
BDNF-208ENST00000418212 STX1AQ16623 288 aa15.22■□□□□ 0.03
BDNF-208ENST00000418212 TTLL12Q14166 644 aaPredicted RBP15.21■□□□□ 0.03
BDNF-208ENST00000418212 CACNA2D4Q7Z3S7 1137 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms