RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 COL4A1P02462 1669 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 SERPINB2P05120 415 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 PRR5LQ6MZQ0 368 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 CASC1Q6TDU7 716 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 CNTROBQ8N137 903 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 NLGN1Q8N2Q7 840 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 SPEF2Q9C093 1822 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 NPHP1O15259 732 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 DDR1Q08345 913 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 ERICH6Q7L0X2 663 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 CCDC24Q8N4L8 307 aa25.35■■□□□ 1.65
CASC3-203ENST00000418132 ANO8Q9HCE9 1232 aaPredicted RBP25.35■■□□□ 1.65
CASC3-203ENST00000418132 POLRMTO00411 1230 aaKnown RBP25.34■■□□□ 1.65
CASC3-203ENST00000418132 PDE8BO95263 885 aa25.34■■□□□ 1.65
CASC3-203ENST00000418132 MFAP1P55081 439 aaKnown RBP25.34■■□□□ 1.65
CASC3-203ENST00000418132 SLC15A2Q16348 729 aa25.34■■□□□ 1.65
CASC3-203ENST00000418132 QSER1Q2KHR3 1735 aa25.34■■□□□ 1.65
CASC3-203ENST00000418132 EIF5BO60841 1220 aaKnown RBP25.33■■□□□ 1.65
CASC3-203ENST00000418132 MAP4K4O95819 1239 aaPredicted RBP25.33■■□□□ 1.65
CASC3-203ENST00000418132 ATP2B3Q16720 1220 aa25.32■■□□□ 1.64
CASC3-203ENST00000418132 ANKRD18AQ8IVF6 992 aa25.32■■□□□ 1.64
CASC3-203ENST00000418132 STK32BQ9NY57 414 aa25.32■■□□□ 1.64
CASC3-203ENST00000418132 CHMLP26374 656 aa25.31■■□□□ 1.64
CASC3-203ENST00000418132 DEFB132Q7Z7B7 95 aa25.31■■□□□ 1.64
CASC3-203ENST00000418132 BOLA2Q9H3K6 86 aa25.31■■□□□ 1.64
CASC3-203ENST00000418132 TAF1P21675 1872 aa25.31■■□□□ 1.64
CASC3-203ENST00000418132 EVI5LQ96CN4 794 aa25.31■■□□□ 1.64
CASC3-203ENST00000418132 TBC1D32Q96NH3 1257 aa25.31■■□□□ 1.64
CASC3-203ENST00000418132 ST5P78524 1137 aa25.3■■□□□ 1.64
CASC3-203ENST00000418132 XAGE2Q96GT9 111 aa25.3■■□□□ 1.64
CASC3-203ENST00000418132 BSDC1Q9NW68 430 aaPredicted RBP25.3■■□□□ 1.64
CASC3-203ENST00000418132 NRXN2Q9P2S2 1712 aa25.3■■□□□ 1.64
CASC3-203ENST00000418132 FGFR2P21802 821 aa25.29■■□□□ 1.64
CASC3-203ENST00000418132 CELF1Q92879 486 aaKnown RBP25.29■■□□□ 1.64
CASC3-203ENST00000418132 PUM3Q15397 648 aaKnown RBP25.28■■□□□ 1.64
CASC3-203ENST00000418132 CCDC125Q86Z20 511 aa25.28■■□□□ 1.64
CASC3-203ENST00000418132 HAUS7Q99871 368 aa25.28■■□□□ 1.64
CASC3-203ENST00000418132 ARAP2Q8WZ64 1704 aa25.28■■□□□ 1.64
CASC3-203ENST00000418132 ADORA1P30542 326 aa25.27■■□□□ 1.64
CASC3-203ENST00000418132 RPS8P62241 208 aaKnown RBP25.27■■□□□ 1.64
CASC3-203ENST00000418132 HELBQ8NG08 1087 aaPredicted RBP25.27■■□□□ 1.64
CASC3-203ENST00000418132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.27■■□□□ 1.64
CASC3-203ENST00000418132 A0A1B0GUL6 1792 aa25.27■■□□□ 1.64
CASC3-203ENST00000418132 DDX46Q7L014 1031 aaKnown RBP25.27■■□□□ 1.64
CASC3-203ENST00000418132 LPIN2Q92539 896 aa25.27■■□□□ 1.64
CASC3-203ENST00000418132 C22orf23Q9BZE7 217 aa25.27■■□□□ 1.64
CASC3-203ENST00000418132 CHRNDQ07001 517 aa25.26■■□□□ 1.63
CASC3-203ENST00000418132 CRY2Q49AN0 593 aa25.26■■□□□ 1.63
CASC3-203ENST00000418132 CCDC158Q5M9N0 1113 aa25.26■■□□□ 1.63
CASC3-203ENST00000418132 ESYT1Q9BSJ8 1104 aa25.25■■□□□ 1.63
CASC3-203ENST00000418132 GORABQ5T7V8 394 aa25.25■■□□□ 1.63
CASC3-203ENST00000418132 KLRG2A4D1S0 409 aaPredicted RBP25.24■■□□□ 1.63
CASC3-203ENST00000418132 TAF5LO75529 589 aa25.24■■□□□ 1.63
CASC3-203ENST00000418132 MINPP1Q9UNW1 487 aa25.24■■□□□ 1.63
CASC3-203ENST00000418132 MMP10P09238 476 aa25.23■■□□□ 1.63
CASC3-203ENST00000418132 REC8O95072 547 aa25.22■■□□□ 1.63
CASC3-203ENST00000418132 IFIT1P09914 478 aaKnown RBP25.22■■□□□ 1.63
CASC3-203ENST00000418132 SLC5A1P13866 664 aa25.22■■□□□ 1.63
CASC3-203ENST00000418132 RBM25P49756 843 aaKnown RBP25.22■■□□□ 1.63
CASC3-203ENST00000418132 TTC39AQ5SRH9 613 aa25.22■■□□□ 1.63
CASC3-203ENST00000418132 ZNF512BQ96KM6 892 aaPredicted RBP25.22■■□□□ 1.63
CASC3-203ENST00000418132 GRAPQ13588 217 aa25.22■■□□□ 1.63
CASC3-203ENST00000418132 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
CASC3-203ENST00000418132 EDC3Q96F86 508 aaKnown RBP25.22■■□□□ 1.63
CASC3-203ENST00000418132 DNAJC2Q99543 621 aaKnown RBP25.22■■□□□ 1.63
CASC3-203ENST00000418132 PARP3Q9Y6F1 533 aa25.22■■□□□ 1.63
CASC3-203ENST00000418132 ANKRD31Q8N7Z5 1873 aa25.21■■□□□ 1.63
CASC3-203ENST00000418132 HIP1O00291 1037 aa25.2■■□□□ 1.63
CASC3-203ENST00000418132 FSD1Q9BTV5 496 aa25.2■■□□□ 1.63
CASC3-203ENST00000418132 BRIP1Q9BX63 1249 aa25.2■■□□□ 1.63
CASC3-203ENST00000418132 USP26Q9BXU7 913 aa25.2■■□□□ 1.63
CASC3-203ENST00000418132 NDUFB9Q9Y6M9 179 aa25.2■■□□□ 1.63
CASC3-203ENST00000418132 RFX7Q2KHR2 1363 aa25.2■■□□□ 1.62
CASC3-203ENST00000418132 MSL1Q68DK7 614 aa25.2■■□□□ 1.62
CASC3-203ENST00000418132 RPGRQ92834 1020 aaKnown RBP25.2■■□□□ 1.62
CASC3-203ENST00000418132 DIAPH3Q9NSV4 1193 aa25.2■■□□□ 1.62
CASC3-203ENST00000418132 PAG1Q9NWQ8 432 aa25.2■■□□□ 1.62
CASC3-203ENST00000418132 SNAP23O00161 211 aa25.19■■□□□ 1.62
CASC3-203ENST00000418132 HOXA10P31260 410 aaPredicted RBP25.19■■□□□ 1.62
CASC3-203ENST00000418132 SGSM2O43147 1006 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 UBE4AQ14139 1066 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 CCDC102BQ68D86 513 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 TICAM2Q86XR7 235 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 KBTBD3Q8NAB2 608 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 IL25Q9H293 177 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 AKAP11Q9UKA4 1901 aa25.18■■□□□ 1.62
CASC3-203ENST00000418132 ARID4AP29374 1257 aaPredicted RBP25.17■■□□□ 1.62
CASC3-203ENST00000418132 SCARF1Q14162 830 aa25.17■■□□□ 1.62
CASC3-203ENST00000418132 RUFY2Q8WXA3 655 aa25.17■■□□□ 1.62
CASC3-203ENST00000418132 RBM17Q96I25 401 aaKnown RBP25.17■■□□□ 1.62
CASC3-203ENST00000418132 ANKRD2Q9GZV1 360 aa25.17■■□□□ 1.62
CASC3-203ENST00000418132 GOLIM4O00461 696 aa25.16■■□□□ 1.62
CASC3-203ENST00000418132 PHKA1P46020 1223 aa25.16■■□□□ 1.62
CASC3-203ENST00000418132 CWC27Q6UX04 472 aaKnown RBP25.16■■□□□ 1.62
CASC3-203ENST00000418132 UQCRFS1P1P0C7P4 283 aa25.16■■□□□ 1.62
CASC3-203ENST00000418132 EPB41L2O43491 1005 aaKnown RBP25.15■■□□□ 1.62
CASC3-203ENST00000418132 CRAMP1Q96RY5 1269 aa25.15■■□□□ 1.62
CASC3-203ENST00000418132 MCAMP43121 646 aa25.14■■□□□ 1.62
CASC3-203ENST00000418132 FKBP4Q02790 459 aaKnown RBP eCLIP25.13■■□□□ 1.61
CASC3-203ENST00000418132 DDRGK1Q96HY6 314 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms