RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
LINC00940-201ENST00000418006 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
LINC00940-201ENST00000418006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00940-201ENST00000418006 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
LINC00940-201ENST00000418006 IRS4O14654 1257 aaPredicted RBP16.53■□□□□ 0.24
LINC00940-201ENST00000418006 SGSM2O43147 1006 aa16.53■□□□□ 0.24
LINC00940-201ENST00000418006 EYA2O00167 538 aa16.53■□□□□ 0.24
LINC00940-201ENST00000418006 MBD3O95983 291 aa16.53■□□□□ 0.24
LINC00940-201ENST00000418006 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
LINC00940-201ENST00000418006 ZSCAN20P17040 1043 aaPredicted RBP16.52■□□□□ 0.24
LINC00940-201ENST00000418006 IL15P40933 162 aaPredicted RBP16.52■□□□□ 0.24
LINC00940-201ENST00000418006 NEK4P51957 841 aa16.52■□□□□ 0.24
LINC00940-201ENST00000418006 NOL8Q76FK4 1167 aaKnown RBP16.52■□□□□ 0.24
LINC00940-201ENST00000418006 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.24
LINC00940-201ENST00000418006 FAM227BQ96M60 508 aa16.52■□□□□ 0.24
LINC00940-201ENST00000418006 GREM2Q9H772 168 aa16.52■□□□□ 0.23
LINC00940-201ENST00000418006 AFF2P51816 1311 aa16.52■□□□□ 0.23
LINC00940-201ENST00000418006 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
LINC00940-201ENST00000418006 DNTTIP2Q5QJE6 756 aaKnown RBP16.51■□□□□ 0.23
LINC00940-201ENST00000418006 FOXD4L5Q5VV16 416 aaPredicted RBP16.51■□□□□ 0.23
LINC00940-201ENST00000418006 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
LINC00940-201ENST00000418006 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
LINC00940-201ENST00000418006 ITGA6P23229 1130 aa16.51■□□□□ 0.23
LINC00940-201ENST00000418006 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
LINC00940-201ENST00000418006 TSPY26PQ9H489 355 aa16.51■□□□□ 0.23
LINC00940-201ENST00000418006 CHGBP05060 677 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
LINC00940-201ENST00000418006 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 GJD4Q96KN9 370 aaPredicted RBP16.5■□□□□ 0.23
LINC00940-201ENST00000418006 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
LINC00940-201ENST00000418006 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 CTSWP56202 376 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
LINC00940-201ENST00000418006 TSC1Q92574 1164 aa16.5■□□□□ 0.23
LINC00940-201ENST00000418006 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
LINC00940-201ENST00000418006 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 ATP5JP18859 108 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 PTH1RQ03431 593 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 ZNF34Q8IZ26 560 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 PRIMPOLQ96LW4 560 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
LINC00940-201ENST00000418006 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00940-201ENST00000418006 CSF1RP07333 972 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
LINC00940-201ENST00000418006 NUP98P52948 1817 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 GORABQ5T7V8 394 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 MYH14Q7Z406 1995 aaKnown RBP16.48■□□□□ 0.23
LINC00940-201ENST00000418006 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
LINC00940-201ENST00000418006 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
LINC00940-201ENST00000418006 GTF2F1P35269 517 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00940-201ENST00000418006 KCNJ4P48050 445 aa16.47■□□□□ 0.23
LINC00940-201ENST00000418006 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
LINC00940-201ENST00000418006 RAD50Q92878 1312 aa16.47■□□□□ 0.23
LINC00940-201ENST00000418006 CDHR2Q9BYE9 1310 aa16.47■□□□□ 0.23
LINC00940-201ENST00000418006 GOLIM4O00461 696 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 PDE8AO60658 829 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 CIAO1O76071 339 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 HSPA4P34932 840 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
LINC00940-201ENST00000418006 METTL24Q5JXM2 366 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 MPNDQ8N594 471 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 ADORA1P30542 326 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
LINC00940-201ENST00000418006 ZNF830Q96NB3 372 aaPredicted RBP16.46■□□□□ 0.23
LINC00940-201ENST00000418006 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.23
LINC00940-201ENST00000418006 BRD1O95696 1058 aa16.45■□□□□ 0.22
LINC00940-201ENST00000418006 CBX1P83916 185 aa16.45■□□□□ 0.22
LINC00940-201ENST00000418006 NOLC1Q14978 699 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00940-201ENST00000418006 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
LINC00940-201ENST00000418006 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
LINC00940-201ENST00000418006 HIP1O00291 1037 aa16.45■□□□□ 0.22
LINC00940-201ENST00000418006 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00940-201ENST00000418006 SEPT12Q8IYM1 358 aa16.45■□□□□ 0.22
LINC00940-201ENST00000418006 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
LINC00940-201ENST00000418006 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
LINC00940-201ENST00000418006 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
LINC00940-201ENST00000418006 ZNF589Q86UQ0 364 aaPredicted RBP16.44■□□□□ 0.22
LINC00940-201ENST00000418006 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
LINC00940-201ENST00000418006 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
LINC00940-201ENST00000418006 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
LINC00940-201ENST00000418006 HAUS7Q99871 368 aa16.44■□□□□ 0.22
LINC00940-201ENST00000418006 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
LINC00940-201ENST00000418006 SNX14Q9Y5W7 946 aa16.44■□□□□ 0.22
LINC00940-201ENST00000418006 ANAPC15P60006 121 aa16.44■□□□□ 0.22
LINC00940-201ENST00000418006 XAGE2Q96GT9 111 aa16.44■□□□□ 0.22
LINC00940-201ENST00000418006 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
LINC00940-201ENST00000418006 CPA1P15085 419 aa16.43■□□□□ 0.22
LINC00940-201ENST00000418006 TTC39AQ5SRH9 613 aa16.43■□□□□ 0.22
LINC00940-201ENST00000418006 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
LINC00940-201ENST00000418006 GTPBP4Q9BZE4 634 aaKnown RBP16.43■□□□□ 0.22
LINC00940-201ENST00000418006 QTRT2Q9H974 415 aaKnown RBP16.43■□□□□ 0.22
LINC00940-201ENST00000418006 GPR108Q9NPR9 543 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms