RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 MICU3Q86XE3 530 aa15.48■□□□□ 0.07
TNFRSF8-203ENST00000417814 LMTK2Q8IWU2 1503 aa15.48■□□□□ 0.07
TNFRSF8-203ENST00000417814 MTERF4Q7Z6M4 381 aaKnown RBP15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 ZNF710Q8N1W2 664 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 MAP4K1Q92918 833 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 TAF5LO75529 589 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 GCKRQ14397 625 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 RALYLQ86SE5 291 aaKnown RBP15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 TNNI3KQ59H18 835 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 ZKSCAN3Q9BRR0 538 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 FPGT-TNNI3KV9GXZ4 949 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 KNDC1Q76NI1 1749 aa15.47■□□□□ 0.07
TNFRSF8-203ENST00000417814 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 DENND2AQ9ULE3 1009 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 DIP2CQ9Y2E4 1556 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 NEURL1BA8MQ27 555 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 COBLO75128 1261 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 KIF24Q5T7B8 1368 aa15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 VIRMAQ69YN4 1812 aaKnown RBP15.46■□□□□ 0.07
TNFRSF8-203ENST00000417814 ARHGEF10O15013 1369 aa15.46■□□□□ 0.06
TNFRSF8-203ENST00000417814 TTC41PQ6P2S7 1318 aa15.46■□□□□ 0.06
TNFRSF8-203ENST00000417814 hCG_1642624A0A1W2PR95 340 aa15.46■□□□□ 0.06
TNFRSF8-203ENST00000417814 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.06
TNFRSF8-203ENST00000417814 TTC39AQ5SRH9 613 aa15.46■□□□□ 0.06
TNFRSF8-203ENST00000417814 MCM5P33992 734 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 CPLX3Q8WVH0 158 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 PHKBQ93100 1093 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 KLF18A0A0U1RQI7 1052 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 KIAA1524Q8TCG1 905 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 ANKRD1Q15327 319 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
TNFRSF8-203ENST00000417814 CCDC69A6NI79 296 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 PTPN14Q15678 1187 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 MCMDC2Q4G0Z9 681 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 ZSCAN25Q6NSZ9 544 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 ORC3Q9UBD5 711 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 ARAP3Q8WWN8 1544 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 ADORA1P30542 326 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 ZNF75DP51815 510 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 KLHL10Q6JEL2 608 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 STOX1Q6ZVD7 989 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 GPIHBP1Q8IV16 184 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 NUP133Q8WUM0 1156 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 SERPINC1P01008 464 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 ANKLE2Q86XL3 938 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 IFNKQ9P0W0 207 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 CGNQ9P2M7 1197 aaKnown RBP15.44■□□□□ 0.06
TNFRSF8-203ENST00000417814 POLR3GO15318 223 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 CEP135Q66GS9 1140 aa15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 UBE2Q2LH0YL09 131 aa15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 CDK11BP21127 795 aaKnown RBP15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 PAG1Q9NWQ8 432 aa15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 HDAC5Q9UQL6 1122 aa15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 ARHGAP31Q2M1Z3 1444 aa15.43■□□□□ 0.06
TNFRSF8-203ENST00000417814 HIP1O00291 1037 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 CFAP45Q9UL16 551 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 EVA1CP58658 441 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 CCDC57Q2TAC2 916 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 EPC1Q9H2F5 836 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 GOLPH3LQ9H4A5 285 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 NPHP3Q7Z494 1330 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 CFAP100Q494V2 611 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 ST7Q9NRC1 585 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 CNNM1Q9NRU3 951 aa15.42■□□□□ 0.06
TNFRSF8-203ENST00000417814 NEO1Q92859 1461 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 ADD1P35611 737 aaKnown RBP15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 SYT10Q6XYQ8 523 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 CLIC4Q9Y696 253 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 ELF2Q15723 593 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 ZNF215Q9UL58 517 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 PTPRUQ92729 1446 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 A0A1B0GUL7 405 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 GTF3C6Q969F1 213 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 DDX19AQ9NUU7 478 aaKnown RBP15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
TNFRSF8-203ENST00000417814 TERF1P54274 439 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 AMOTQ4VCS5 1084 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 KCNH5Q8NCM2 988 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 ZNF827Q17R98 1081 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 CLIC6Q96NY7 704 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 CLSTN2Q9H4D0 955 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 JAG2Q9Y219 1238 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 TRDNQ13061 729 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 CEP57L1Q8IYX8 460 aa15.4■□□□□ 0.06
TNFRSF8-203ENST00000417814 TMEM131LA2VDJ0 1609 aa15.39■□□□□ 0.05
TNFRSF8-203ENST00000417814 URI1O94763 535 aaPredicted RBP15.39■□□□□ 0.05
TNFRSF8-203ENST00000417814 ATF3P18847 181 aa15.39■□□□□ 0.05
TNFRSF8-203ENST00000417814 STAMQ92783 540 aa15.39■□□□□ 0.05
TNFRSF8-203ENST00000417814 PRIMPOLQ96LW4 560 aa15.39■□□□□ 0.05
TNFRSF8-203ENST00000417814 PRDM11Q9NQV5 511 aa15.39■□□□□ 0.05
TNFRSF8-203ENST00000417814 NDUFA8P51970 172 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms