RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 DDIT3P35638 169 aa20.23■□□□□ 0.83
SSBP3-205ENST00000417664 NEK4P51957 841 aa20.23■□□□□ 0.83
SSBP3-205ENST00000417664 NBR1Q14596 966 aa20.23■□□□□ 0.83
SSBP3-205ENST00000417664 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
SSBP3-205ENST00000417664 PALD1Q9ULE6 856 aa20.23■□□□□ 0.83
SSBP3-205ENST00000417664 KCNQ4P56696 695 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 NFKBIBQ15653 356 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 TTC39AQ5SRH9 613 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 MAP4K1Q92918 833 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 A0A0D9SFI3 127 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 ADRA2BP18089 450 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 SLC10A5Q5PT55 438 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-205ENST00000417664 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
SSBP3-205ENST00000417664 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
SSBP3-205ENST00000417664 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
SSBP3-205ENST00000417664 SF3B3Q15393 1217 aaKnown RBP20.21■□□□□ 0.83
SSBP3-205ENST00000417664 EDC3Q96F86 508 aaKnown RBP20.21■□□□□ 0.83
SSBP3-205ENST00000417664 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
SSBP3-205ENST00000417664 SNX14Q9Y5W7 946 aa20.21■□□□□ 0.83
SSBP3-205ENST00000417664 C4BP0C0L5 1744 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-205ENST00000417664 NECTIN1Q15223 517 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 PUM3Q15397 648 aaKnown RBP20.2■□□□□ 0.82
SSBP3-205ENST00000417664 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 LPIN2Q92539 896 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 CDC5LQ99459 802 aaKnown RBP20.2■□□□□ 0.82
SSBP3-205ENST00000417664 TM6SF1Q9BZW5 370 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 HELLSQ9NRZ9 838 aa20.2■□□□□ 0.82
SSBP3-205ENST00000417664 GOLIM4O00461 696 aa20.19■□□□□ 0.82
SSBP3-205ENST00000417664 PTH1RQ03431 593 aa20.19■□□□□ 0.82
SSBP3-205ENST00000417664 MCMDC2Q4G0Z9 681 aa20.19■□□□□ 0.82
SSBP3-205ENST00000417664 RNF20Q5VTR2 975 aa20.19■□□□□ 0.82
SSBP3-205ENST00000417664 DDX46Q7L014 1031 aaKnown RBP20.19■□□□□ 0.82
SSBP3-205ENST00000417664 CWC22Q9HCG8 908 aaKnown RBP20.19■□□□□ 0.82
SSBP3-205ENST00000417664 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
SSBP3-205ENST00000417664 TBC1D9BQ66K14 1250 aa20.19■□□□□ 0.82
SSBP3-205ENST00000417664 ARHGEF1Q92888 912 aaKnown RBP20.19■□□□□ 0.82
SSBP3-205ENST00000417664 ZFYP08048 801 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-205ENST00000417664 FGFR2P21802 821 aa20.18■□□□□ 0.82
SSBP3-205ENST00000417664 ADORA1P30542 326 aa20.18■□□□□ 0.82
SSBP3-205ENST00000417664 TRAPPC3LQ5T215 181 aa20.18■□□□□ 0.82
SSBP3-205ENST00000417664 HMG20BQ9P0W2 317 aa20.18■□□□□ 0.82
SSBP3-205ENST00000417664 RBM8AQ9Y5S9 174 aaKnown RBP20.18■□□□□ 0.82
SSBP3-205ENST00000417664 COL24A1Q17RW2 1714 aa20.18■□□□□ 0.82
SSBP3-205ENST00000417664 UQCRFS1P1P0C7P4 283 aa20.17■□□□□ 0.82
SSBP3-205ENST00000417664 SSFA2P28290 1259 aa20.17■□□□□ 0.82
SSBP3-205ENST00000417664 GTF2E1P29083 439 aaPredicted RBP20.17■□□□□ 0.82
SSBP3-205ENST00000417664 RFC4P35249 363 aa20.17■□□□□ 0.82
SSBP3-205ENST00000417664 KCNJ4P48050 445 aa20.17■□□□□ 0.82
SSBP3-205ENST00000417664 TAF5LO75529 589 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 SLC5A1P13866 664 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 ERFEQ4G0M1 354 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 TPTE2Q6XPS3 522 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 TTF1Q15361 905 aaPredicted RBP20.16■□□□□ 0.82
SSBP3-205ENST00000417664 TSGA10IPQ3SY00 556 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 ZMYM1Q5SVZ6 1142 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
SSBP3-205ENST00000417664 RASEFQ8IZ41 740 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 SEC31BQ9NQW1 1179 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 NDUFB9Q9Y6M9 179 aa20.16■□□□□ 0.82
SSBP3-205ENST00000417664 BRWD3Q6RI45 1802 aa20.15■□□□□ 0.82
SSBP3-205ENST00000417664 RNF113AO15541 343 aaKnown RBP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 PSMA5P28066 241 aa20.15■□□□□ 0.82
SSBP3-205ENST00000417664 ARID4AP29374 1257 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 CREB3L3Q68CJ9 461 aa20.15■□□□□ 0.82
SSBP3-205ENST00000417664 ZNF589Q86UQ0 364 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 NBPF5PQ86XG9 351 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 SRP68Q9UHB9 627 aaKnown RBP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 U3KPZ7 1027 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-205ENST00000417664 ARAP2Q8WZ64 1704 aa20.15■□□□□ 0.82
SSBP3-205ENST00000417664 ANKRD18AQ8IVF6 992 aa20.14■□□□□ 0.81
SSBP3-205ENST00000417664 LRRC4BQ9NT99 713 aa20.14■□□□□ 0.81
SSBP3-205ENST00000417664 CUL4AQ13619 759 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 INTS4Q96HW7 963 aaKnown RBP20.13■□□□□ 0.81
SSBP3-205ENST00000417664 TMX3Q96JJ7 454 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 NLRP3Q96P20 1036 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 UPF3BQ9BZI7 483 aaKnown RBP20.13■□□□□ 0.81
SSBP3-205ENST00000417664 KRT32Q14532 448 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 ZSCAN25Q6NSZ9 544 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 TTC14Q96N46 770 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 DSCC1Q9BVC3 393 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.13■□□□□ 0.811e-6■■■□□ 18.5
SSBP3-205ENST00000417664 ZSWIM6Q9HCJ5 1215 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 BSDC1Q9NW68 430 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-205ENST00000417664 C4AP0C0L4 1744 aa20.13■□□□□ 0.81
SSBP3-205ENST00000417664 SLC27A2O14975 620 aa20.12■□□□□ 0.81
SSBP3-205ENST00000417664 VPS53Q5VIR6 699 aa20.12■□□□□ 0.81
SSBP3-205ENST00000417664 CCDC102BQ68D86 513 aa20.12■□□□□ 0.81
SSBP3-205ENST00000417664 CYP46A1Q9Y6A2 500 aa20.12■□□□□ 0.81
SSBP3-205ENST00000417664 CARMIL3Q8ND23 1372 aa20.12■□□□□ 0.81
SSBP3-205ENST00000417664 MCAMP43121 646 aa20.11■□□□□ 0.81
SSBP3-205ENST00000417664 ZAP70P43403 619 aa20.11■□□□□ 0.81
SSBP3-205ENST00000417664 NUCB2P80303 420 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms