RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 H3BQV1 296 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 DYNC1I1O14576 645 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 CASP7P55210 303 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
HDAC9-208ENST00000417496 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
HDAC9-208ENST00000417496 NAP1L2Q9ULW6 460 aaPredicted RBP17.13■□□□□ 0.33
HDAC9-208ENST00000417496 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
HDAC9-208ENST00000417496 KRT32Q14532 448 aa17.12■□□□□ 0.33
HDAC9-208ENST00000417496 CBX8Q9HC52 389 aa17.12■□□□□ 0.33
HDAC9-208ENST00000417496 FOXO4P98177 505 aa17.12■□□□□ 0.33
HDAC9-208ENST00000417496 APOBRQ0VD83 1088 aa17.12■□□□□ 0.33
HDAC9-208ENST00000417496 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
HDAC9-208ENST00000417496 PTGS1P23219 599 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 RESTQ13127 1097 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
HDAC9-208ENST00000417496 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 A1BGP04217 495 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 KIAA1524Q8TCG1 905 aa17.11■□□□□ 0.33
HDAC9-208ENST00000417496 A0A087WWV3 80 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 MYRIPQ8NFW9 859 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 DNAJC25Q9H1X3 360 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 ZBTB3Q9H5J0 574 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 MRC1P22897 1456 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 PAG1Q9NWQ8 432 aa17.1■□□□□ 0.33
HDAC9-208ENST00000417496 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
HDAC9-208ENST00000417496 LRMPQ12912 555 aa17.09■□□□□ 0.33
HDAC9-208ENST00000417496 CLSTN2Q9H4D0 955 aa17.09■□□□□ 0.33
HDAC9-208ENST00000417496 TTLL5Q6EMB2 1281 aa17.09■□□□□ 0.33
HDAC9-208ENST00000417496 PUS3Q9BZE2 481 aaKnown RBP17.09■□□□□ 0.33
HDAC9-208ENST00000417496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDAC9-208ENST00000417496 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.33
HDAC9-208ENST00000417496 CCDC85AQ96PX6 553 aaPredicted RBP17.08■□□□□ 0.33
HDAC9-208ENST00000417496 TRPM3Q9HCF6 1732 aaPredicted RBP17.08■□□□□ 0.32
HDAC9-208ENST00000417496 ATF3P18847 181 aa17.08■□□□□ 0.32
HDAC9-208ENST00000417496 DHX32Q7L7V1 743 aaKnown RBP17.08■□□□□ 0.32
HDAC9-208ENST00000417496 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
HDAC9-208ENST00000417496 DRC7Q8IY82 874 aa17.08■□□□□ 0.32
HDAC9-208ENST00000417496 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
HDAC9-208ENST00000417496 ZMYND15Q9H091 742 aa17.08■□□□□ 0.32
HDAC9-208ENST00000417496 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.32
HDAC9-208ENST00000417496 ADAMTS7Q9UKP4 1686 aa17.08■□□□□ 0.32
HDAC9-208ENST00000417496 CAMTA1Q9Y6Y1 1673 aa17.08■□□□□ 0.32
HDAC9-208ENST00000417496 H7C1W4 665 aa17.07■□□□□ 0.32
HDAC9-208ENST00000417496 ADD1P35611 737 aaKnown RBP17.07■□□□□ 0.32
HDAC9-208ENST00000417496 ZNF165P49910 485 aa17.07■□□□□ 0.32
HDAC9-208ENST00000417496 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
HDAC9-208ENST00000417496 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
HDAC9-208ENST00000417496 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
HDAC9-208ENST00000417496 ERCC4Q92889 916 aaPredicted RBP17.07■□□□□ 0.32
HDAC9-208ENST00000417496 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
HDAC9-208ENST00000417496 HSPD1P10809 573 aaKnown RBP17.06■□□□□ 0.32
HDAC9-208ENST00000417496 PFKFB2O60825 505 aa17.06■□□□□ 0.32
HDAC9-208ENST00000417496 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
HDAC9-208ENST00000417496 SCN11AQ9UI33 1791 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 E7EWF7 191 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 RBM43Q6ZSC3 357 aaKnown RBP17.05■□□□□ 0.32
HDAC9-208ENST00000417496 ZNF710Q8N1W2 664 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
HDAC9-208ENST00000417496 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
HDAC9-208ENST00000417496 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 PRIMPOLQ96LW4 560 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
HDAC9-208ENST00000417496 GOLGA6L6A8MZA4 724 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 HAND2P61296 217 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
HDAC9-208ENST00000417496 USP28Q96RU2 1077 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 MAST3O60307 1309 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 M0R2C6 588 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 ZMYM1Q5SVZ6 1142 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 OTUD7BQ6GQQ9 843 aa17.04■□□□□ 0.32
HDAC9-208ENST00000417496 CCAR1Q8IX12 1150 aaKnown RBP17.04■□□□□ 0.32
HDAC9-208ENST00000417496 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
HDAC9-208ENST00000417496 ZNF75DP51815 510 aa17.03■□□□□ 0.32
HDAC9-208ENST00000417496 HMGN5P82970 282 aaKnown RBP17.03■□□□□ 0.32
HDAC9-208ENST00000417496 C11orf57Q6ZUT1 292 aaPredicted RBP17.03■□□□□ 0.32
HDAC9-208ENST00000417496 RAB11FIP4Q86YS3 637 aa17.03■□□□□ 0.32
HDAC9-208ENST00000417496 OSBP2Q969R2 916 aa17.03■□□□□ 0.32
HDAC9-208ENST00000417496 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
HDAC9-208ENST00000417496 HELLSQ9NRZ9 838 aa17.03■□□□□ 0.32
HDAC9-208ENST00000417496 EYA2O00167 538 aa17.02■□□□□ 0.32
HDAC9-208ENST00000417496 ADORA1P30542 326 aa17.02■□□□□ 0.32
HDAC9-208ENST00000417496 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.32
HDAC9-208ENST00000417496 MAP7D2Q96T17 732 aa17.02■□□□□ 0.32
HDAC9-208ENST00000417496 DSCC1Q9BVC3 393 aa17.02■□□□□ 0.32
HDAC9-208ENST00000417496 TMEM94Q12767 1356 aa17.02■□□□□ 0.32
HDAC9-208ENST00000417496 HMGB1P09429 215 aaKnown RBP17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms