RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 IGHMBP2P38935 993 aaKnown RBP21.91■■□□□ 1.1
RTN4R-202ENST00000416372 CWC27Q6UX04 472 aaKnown RBP21.91■■□□□ 1.1
RTN4R-202ENST00000416372 XAGE2Q96GT9 111 aa21.91■■□□□ 1.1
RTN4R-202ENST00000416372 DNAJC2Q99543 621 aaKnown RBP21.91■■□□□ 1.1
RTN4R-202ENST00000416372 SGSM2O43147 1006 aa21.9■■□□□ 1.1
RTN4R-202ENST00000416372 SF3B3Q15393 1217 aaKnown RBP21.9■■□□□ 1.1
RTN4R-202ENST00000416372 KIF2CQ99661 725 aa21.9■■□□□ 1.1
RTN4R-202ENST00000416372 ABCC12Q96J65 1359 aa21.9■■□□□ 1.1
RTN4R-202ENST00000416372 EP400Q96L91 3159 aa21.9■■□□□ 1.1
RTN4R-202ENST00000416372 ADORA1P30542 326 aa21.89■■□□□ 1.1
RTN4R-202ENST00000416372 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.1
RTN4R-202ENST00000416372 VGLL2Q8N8G2 317 aa21.89■■□□□ 1.1
RTN4R-202ENST00000416372 CDC5LQ99459 802 aaKnown RBP21.89■■□□□ 1.1
RTN4R-202ENST00000416372 CARMIL3Q8ND23 1372 aa21.89■■□□□ 1.09
RTN4R-202ENST00000416372 NPHP1O15259 732 aa21.89■■□□□ 1.09
RTN4R-202ENST00000416372 PDE8BO95263 885 aa21.89■■□□□ 1.09
RTN4R-202ENST00000416372 NFIXQ14938 502 aa21.89■■□□□ 1.09
RTN4R-202ENST00000416372 C3orf67Q6ZVT6 689 aa21.89■■□□□ 1.09
RTN4R-202ENST00000416372 EDC3Q96F86 508 aaKnown RBP21.89■■□□□ 1.09
RTN4R-202ENST00000416372 IL25Q9H293 177 aa21.89■■□□□ 1.09
RTN4R-202ENST00000416372 SPEF2Q9C093 1822 aa21.88■■□□□ 1.09
RTN4R-202ENST00000416372 CASZ1Q86V15 1759 aa21.88■■□□□ 1.09
RTN4R-202ENST00000416372 IFIT1P09914 478 aaKnown RBP21.88■■□□□ 1.09
RTN4R-202ENST00000416372 TTC39AQ5SRH9 613 aa21.88■■□□□ 1.09
RTN4R-202ENST00000416372 NLRP3Q96P20 1036 aa21.88■■□□□ 1.09
RTN4R-202ENST00000416372 MCCP23508 829 aa21.87■■□□□ 1.09
RTN4R-202ENST00000416372 KIAA1211Q6ZU35 1233 aa21.87■■□□□ 1.09
RTN4R-202ENST00000416372 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
RTN4R-202ENST00000416372 NDUFB9Q9Y6M9 179 aa21.87■■□□□ 1.09
RTN4R-202ENST00000416372 HELBQ8NG08 1087 aaPredicted RBP21.87■■□□□ 1.09
RTN4R-202ENST00000416372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.87■■□□□ 1.09
RTN4R-202ENST00000416372 EPB41L2O43491 1005 aaKnown RBP21.86■■□□□ 1.09
RTN4R-202ENST00000416372 GYS1P13807 737 aa21.86■■□□□ 1.09
RTN4R-202ENST00000416372 PUM3Q15397 648 aaKnown RBP21.86■■□□□ 1.09
RTN4R-202ENST00000416372 ANKRD18AQ8IVF6 992 aa21.86■■□□□ 1.09
RTN4R-202ENST00000416372 CCDC24Q8N4L8 307 aa21.86■■□□□ 1.09
RTN4R-202ENST00000416372 NMIQ13287 307 aaPredicted RBP21.85■■□□□ 1.09
RTN4R-202ENST00000416372 PAG1Q9NWQ8 432 aa21.85■■□□□ 1.09
RTN4R-202ENST00000416372 TFCP2L1Q9NZI6 479 aa21.85■■□□□ 1.09
RTN4R-202ENST00000416372 TNS1Q9HBL0 1735 aaKnown RBP21.85■■□□□ 1.09
RTN4R-202ENST00000416372 GOLIM4O00461 696 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
RTN4R-202ENST00000416372 RFX7Q2KHR2 1363 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 RABEP1Q15276 862 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 HSCBQ8IWL3 235 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 CNBD1Q8NA66 436 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 LPIN2Q92539 896 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 FAM227BQ96M60 508 aa21.84■■□□□ 1.09
RTN4R-202ENST00000416372 SLC5A1P13866 664 aa21.83■■□□□ 1.09
RTN4R-202ENST00000416372 ZNF827Q17R98 1081 aa21.83■■□□□ 1.09
RTN4R-202ENST00000416372 KBTBD3Q8NAB2 608 aa21.83■■□□□ 1.09
RTN4R-202ENST00000416372 LSG1Q9H089 658 aaKnown RBP21.83■■□□□ 1.09
RTN4R-202ENST00000416372 RAD50Q92878 1312 aa21.83■■□□□ 1.08
RTN4R-202ENST00000416372 TAF5LO75529 589 aa21.82■■□□□ 1.08
RTN4R-202ENST00000416372 FGFR2P21802 821 aa21.82■■□□□ 1.08
RTN4R-202ENST00000416372 SNX21Q969T3 373 aa21.82■■□□□ 1.08
RTN4R-202ENST00000416372 AKT1S1Q96B36 256 aa21.82■■□□□ 1.08
RTN4R-202ENST00000416372 COL4A1P02462 1669 aa21.81■■□□□ 1.08
RTN4R-202ENST00000416372 TAF1P21675 1872 aa21.81■■□□□ 1.08
RTN4R-202ENST00000416372 A0A0D9SFI3 127 aa21.81■■□□□ 1.08
RTN4R-202ENST00000416372 FKBP4Q02790 459 aaKnown RBP eCLIP21.81■■□□□ 1.08
RTN4R-202ENST00000416372 CHRNDQ07001 517 aa21.81■■□□□ 1.08
RTN4R-202ENST00000416372 SNRKQ9NRH2 765 aa21.81■■□□□ 1.08
RTN4R-202ENST00000416372 BSDC1Q9NW68 430 aaPredicted RBP21.81■■□□□ 1.08
RTN4R-202ENST00000416372 ARAP2Q8WZ64 1704 aa21.81■■□□□ 1.08
RTN4R-202ENST00000416372 TM4SF1P30408 202 aa21.8■■□□□ 1.08
RTN4R-202ENST00000416372 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
RTN4R-202ENST00000416372 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 ANAPC15P60006 121 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 TICAM2Q86XR7 235 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 CELF1Q92879 486 aaKnown RBP21.79■■□□□ 1.08
RTN4R-202ENST00000416372 ZNF512BQ96KM6 892 aaPredicted RBP21.79■■□□□ 1.08
RTN4R-202ENST00000416372 SERPINB2P05120 415 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 HSPA4P34932 840 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 RPS8P62241 208 aaKnown RBP21.79■■□□□ 1.08
RTN4R-202ENST00000416372 SCARF1Q14162 830 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 PRR5LQ6MZQ0 368 aa21.79■■□□□ 1.08
RTN4R-202ENST00000416372 TNRC6CQ9HCJ0 1690 aaKnown RBP21.78■■□□□ 1.08
RTN4R-202ENST00000416372 UQCRFS1P1P0C7P4 283 aa21.78■■□□□ 1.08
RTN4R-202ENST00000416372 CCDC102BQ68D86 513 aa21.78■■□□□ 1.08
RTN4R-202ENST00000416372 FLAD1Q8NFF5 587 aa21.78■■□□□ 1.08
RTN4R-202ENST00000416372 PALD1Q9ULE6 856 aa21.78■■□□□ 1.08
RTN4R-202ENST00000416372 CCDC171Q6TFL3 1326 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 SNAP23O00161 211 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 ZAP70P43403 619 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 PHKA1P46020 1223 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 ST5P78524 1137 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 PTH1RQ03431 593 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 COL23A1Q86Y22 540 aaPredicted RBP21.77■■□□□ 1.08
RTN4R-202ENST00000416372 ANTXR1Q9H6X2 564 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 MED23Q9ULK4 1368 aa21.77■■□□□ 1.08
RTN4R-202ENST00000416372 MINPP1Q9UNW1 487 aa21.76■■□□□ 1.07
RTN4R-202ENST00000416372 ARID4AP29374 1257 aaPredicted RBP21.76■■□□□ 1.07
RTN4R-202ENST00000416372 MCAMP43121 646 aa21.76■■□□□ 1.07
RTN4R-202ENST00000416372 NBR1Q14596 966 aa21.76■■□□□ 1.07
RTN4R-202ENST00000416372 LRRFIP1Q32MZ4 808 aaKnown RBP21.76■■□□□ 1.07
RTN4R-202ENST00000416372 MCMDC2Q4G0Z9 681 aa21.75■■□□□ 1.07
RTN4R-202ENST00000416372 PI16Q6UXB8 463 aa21.75■■□□□ 1.07
RTN4R-202ENST00000416372 A0A1B0GUL6 1792 aa21.75■■□□□ 1.07
RTN4R-202ENST00000416372 RNF113AO15541 343 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms