RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 C19orf44Q9H6X5 657 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 URI1O94763 535 aaPredicted RBP12.21□□□□□ -0.45
COL12A1-203ENST00000416123 HOXC9P31274 260 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 PDE1AP54750 535 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 ZKSCAN3Q9BRR0 538 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 ZC3H12CQ9C0D7 883 aaKnown RBP12.21□□□□□ -0.45
COL12A1-203ENST00000416123 HMG20BQ9P0W2 317 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 PSMD1Q99460 953 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 PRPF4BQ13523 1007 aaKnown RBP12.21□□□□□ -0.45
COL12A1-203ENST00000416123 KIF4BQ2VIQ3 1234 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 VPS36Q86VN1 386 aa12.21□□□□□ -0.45
COL12A1-203ENST00000416123 EIF3JO75822 258 aaKnown RBP12.21□□□□□ -0.46
COL12A1-203ENST00000416123 GIMAP6Q6P9H5 292 aa12.21□□□□□ -0.46
COL12A1-203ENST00000416123 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.46
COL12A1-203ENST00000416123 EXOC1Q9NV70 894 aa12.21□□□□□ -0.46
COL12A1-203ENST00000416123 FLT4P35916 1363 aa12.21□□□□□ -0.46
COL12A1-203ENST00000416123 ESR2Q92731 530 aa12.21□□□□□ -0.46
COL12A1-203ENST00000416123 CNPY2Q9Y2B0 182 aa12.21□□□□□ -0.46
COL12A1-203ENST00000416123 KDM5AP29375 1690 aaKnown RBP12.21□□□□□ -0.46
COL12A1-203ENST00000416123 STAT6P42226 847 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 TPTE2Q6XPS3 522 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 MCM9Q9NXL9 1143 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 NOP2P46087 812 aaKnown RBP12.2□□□□□ -0.46
COL12A1-203ENST00000416123 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
COL12A1-203ENST00000416123 STX1AQ16623 288 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 ZBTB21Q9ULJ3 1066 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 CETN2P41208 172 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 CTAGE5O15320 804 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 NAPAP54920 295 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
COL12A1-203ENST00000416123 ERICH4A6NGS2 130 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 TMCO5BA8MYB1 307 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 CTNNA2P26232 953 aa12.2□□□□□ -0.46
COL12A1-203ENST00000416123 KIAA0754O94854 1291 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 MTERF4Q7Z6M4 381 aaKnown RBP12.19□□□□□ -0.46
COL12A1-203ENST00000416123 FAM89AQ96GI7 184 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 IL15P40933 162 aaPredicted RBP12.19□□□□□ -0.46
COL12A1-203ENST00000416123 C16orf45Q96MC5 204 aaPredicted RBP12.19□□□□□ -0.46
COL12A1-203ENST00000416123 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 PCDH11XQ9BZA7 1347 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 PCDH11YQ9BZA8 1340 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 GSTTP1A0A1W2PQM5 241 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
COL12A1-203ENST00000416123 LUZP1Q86V48 1076 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 UBXN4Q92575 508 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 ORAI2Q96SN7 254 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 SYKP43405 635 aa12.19□□□□□ -0.46
COL12A1-203ENST00000416123 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-203ENST00000416123 DYDC1Q8WWB3 177 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 ESPNB1AK53 854 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 ADCY5O95622 1261 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 SP4Q02446 784 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 ZSCAN12O43309 604 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 YEATS4O95619 227 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 TRIM47Q96LD4 638 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 TBCAO75347 108 aaKnown RBP12.18□□□□□ -0.46
COL12A1-203ENST00000416123 POLD1P28340 1107 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 AKNAD1Q5T1N1 836 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 CNNM2Q9H8M5 875 aa12.18□□□□□ -0.46
COL12A1-203ENST00000416123 CETN1Q12798 172 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 ZFYP08048 801 aaPredicted RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 RAB3GAP1Q15042 981 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 DPH6Q7L8W6 267 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 YTHDC2Q9H6S0 1430 aaKnown RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 TRPM2O94759 1503 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 PLIN2Q99541 437 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 HDAC1Q13547 482 aaPredicted RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 CCDC102BQ68D86 513 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 TBC1D32Q96NH3 1257 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 SMARCC2Q8TAQ2 1214 aa12.17□□□□□ -0.46
COL12A1-203ENST00000416123 ZNF594Q96JF6 807 aaPredicted RBP12.17□□□□□ -0.46
COL12A1-203ENST00000416123 ZSCAN22P10073 491 aaPredicted RBP12.16□□□□□ -0.46
COL12A1-203ENST00000416123 MCM7P33993 719 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 UBE2HP62256 183 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
COL12A1-203ENST00000416123 DDX19AQ9NUU7 478 aaKnown RBP12.16□□□□□ -0.46
COL12A1-203ENST00000416123 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 DCAF5Q96JK2 942 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 TERF1P54274 439 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 CEP85Q6P2H3 762 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 IP6K1Q92551 441 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 RLBP1P12271 317 aa12.16□□□□□ -0.46
COL12A1-203ENST00000416123 RRAGBQ5VZM2 374 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms