RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
TRAPPC13-203ENST00000415825 FOXO3O43524 673 aa7.02□□□□□ -1.29
TRAPPC13-203ENST00000415825 EGFRP00533 1210 aa7.02□□□□□ -1.29
TRAPPC13-203ENST00000415825 DUOXA2Q1HG44 320 aa7.02□□□□□ -1.29
TRAPPC13-203ENST00000415825 TPRNQ4KMQ1 711 aa7.02□□□□□ -1.29
TRAPPC13-203ENST00000415825 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
TRAPPC13-203ENST00000415825 SPINK2P20155 84 aa7.01□□□□□ -1.29
TRAPPC13-203ENST00000415825 DTX1Q86Y01 620 aa7.01□□□□□ -1.29
TRAPPC13-203ENST00000415825 UBL7Q96S82 380 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-203ENST00000415825 POM121CA8CG34 1229 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 LINC01387J3KSC0 135 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 MMP20O60882 483 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 DPYDQ12882 1025 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 FLIIQ13045 1269 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 CLEC10AQ8IUN9 316 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 KLHL23Q8NBE8 558 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 MYRFLQ96LU7 910 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 UCN2Q96RP3 112 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 ATG3Q9NT62 314 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 FAM13BQ9NYF5 915 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 TRIM33Q9UPN9 1127 aa7□□□□□ -1.29
TRAPPC13-203ENST00000415825 HMX2A2RU54 273 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 CDC27P30260 824 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 HYAL2Q12891 473 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 CEP135Q66GS9 1140 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 TREML1Q86YW5 311 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 ASIC4Q96FT7 647 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 LACRTQ9GZZ8 138 aa6.99□□□□□ -1.29
TRAPPC13-203ENST00000415825 GAS2O43903 313 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 LGR5O75473 907 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 CABP4P57796 275 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 BEND4Q6ZU67 534 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 NLRP13Q86W25 1043 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 MYO19Q96H55 970 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 POM121Q96HA1 1249 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 TFIP11Q9UBB9 837 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 USP20Q9Y2K6 914 aa6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 ARID1BQ8NFD5 2236 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC13-203ENST00000415825 DKK1O94907 266 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 BMP3P12645 472 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 HOXD8P13378 290 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 CDC25BP30305 580 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 SCNN1AP37088 669 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 LCE1DQ5T752 114 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 TTC39BQ5VTQ0 682 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 ANKRD34AQ69YU3 496 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 FDX2Q6P4F2 183 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 ANKMY2Q8IV38 441 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 ARMC10Q8N2F6 343 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 FAM83CQ9BQN1 747 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 QTRT2Q9H974 415 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 HIF3AQ9Y2N7 669 aa6.97□□□□□ -1.29
TRAPPC13-203ENST00000415825 WDR64B1ANS9 1081 aa6.96□□□□□ -1.3
TRAPPC13-203ENST00000415825 ADAMTS19Q8TE59 1207 aa6.96□□□□□ -1.3
TRAPPC13-203ENST00000415825 PIK3R5Q8WYR1 880 aa6.96□□□□□ -1.3
TRAPPC13-203ENST00000415825 FAM46AQ96IP4 442 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-203ENST00000415825 LEMD3Q9Y2U8 911 aa6.96□□□□□ -1.3
TRAPPC13-203ENST00000415825 MAFBQ9Y5Q3 323 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-203ENST00000415825 UBAP1LF5GYI3 381 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 OPLAHO14841 1288 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 FSCN2O14926 492 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 TXNDC11Q6PKC3 985 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 FAM20CQ8IXL6 584 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 SEC31BQ9NQW1 1179 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 PIM2Q9P1W9 311 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 ADGRE2Q9UHX3 823 aa6.95□□□□□ -1.3
TRAPPC13-203ENST00000415825 FAM196BA6NMK8 535 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L15C9J2P7 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L10C9JJH3 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L13C9JLJ4 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L12C9JPN9 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L11C9JVI0 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L21D6R901 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L18D6R9N7 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L22D6RA61 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L17D6RBQ6 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L19D6RCP7 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L20D6RJB6 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 WISP1O95388 367 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 PTPRAP18433 802 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 RXRBP28702 533 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 USP17L24Q0WX57 530 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 PTK7Q13308 1070 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 TP53INP2Q8IXH6 220 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 GALNT11Q8NCW6 608 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 FBXL18Q96ME1 805 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 CARD10Q9BWT7 1032 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 OSBPL1AQ9BXW6 950 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 RNF208Q9H0X6 261 aa6.94□□□□□ -1.3
TRAPPC13-203ENST00000415825 PRR19A6NJB7 356 aa6.93□□□□□ -1.3
TRAPPC13-203ENST00000415825 ARL4DP49703 201 aa6.93□□□□□ -1.3
TRAPPC13-203ENST00000415825 CPSF6Q16630 551 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRAPPC13-203ENST00000415825 CRTC2Q53ET0 693 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-203ENST00000415825 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-203ENST00000415825 KRTAP4-7Q9BYR0 210 aa6.93□□□□□ -1.3
TRAPPC13-203ENST00000415825 BRD2P25440 801 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms