RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 CARD14Q9BXL6 1004 aa6.16□□□□□ -1.42
GTF3C2-203ENST00000415683 TSR3Q9UJK0 312 aaKnown RBP6.16□□□□□ -1.42
GTF3C2-203ENST00000415683 IVNS1ABPQ9Y6Y0 642 aa6.16□□□□□ -1.42
GTF3C2-203ENST00000415683 CAMTA1Q9Y6Y1 1673 aa6.16□□□□□ -1.42
GTF3C2-203ENST00000415683 COL5A2P05997 1499 aaPredicted RBP6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 RNF40O75150 1001 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 TATP17735 454 aaPredicted RBP6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 PTPRNQ16849 979 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 HSP90AB2PQ58FF8 381 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 B4GALNT3Q6L9W6 998 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 BLOC1S3Q6QNY0 202 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 RINLQ6ZS11 566 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 ZCRB1Q8TBF4 217 aaKnown RBP6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 EVI5LQ96CN4 794 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 CAMKK2Q96RR4 588 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 METTL14Q9HCE5 456 aaKnown RBP6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 ZMIZ1Q9ULJ6 1067 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 RPS6KL1Q9Y6S9 549 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 ITSN1Q15811 1721 aa6.15□□□□□ -1.42
GTF3C2-203ENST00000415683 BRWD3Q6RI45 1802 aa6.15□□□□□ -1.43
GTF3C2-203ENST00000415683 TRPM3Q9HCF6 1732 aaPredicted RBP6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 PIK3CDO00329 1044 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 KCNQ2O43526 872 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 MAP4K4O95819 1239 aaPredicted RBP6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 JUNDP17535 347 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 KRBA2Q6ZNG9 492 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 STK32BQ9NY57 414 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 PPP1R1BQ9UD71 204 aaPredicted RBP6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 GPSM3Q9Y4H4 160 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 EMILIN1Q9Y6C2 1016 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 SMG6Q86US8 1419 aaKnown RBP6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 CD163L1Q9NR16 1453 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 ALS2Q96Q42 1657 aa6.14□□□□□ -1.43
GTF3C2-203ENST00000415683 CLGNO14967 610 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 PLSCR1O15162 318 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 PEX14O75381 377 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 EIF3JO75822 258 aaKnown RBP6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 FOXD4Q12950 439 aaPredicted RBP6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 SDR16C5Q8N3Y7 309 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 ZNF622Q969S3 477 aaKnown RBP eCLIP6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 OVOS2A0A0G2JMS6 1433 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 OVOS2A0A0J9YW53 1432 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 OVOS2Q6IE36 1432 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 NSD3Q9BZ95 1437 aa6.13□□□□□ -1.43
GTF3C2-203ENST00000415683 USP17L3A6NCW0 530 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 USP17L4A6NCW7 530 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 FAM196BA6NMK8 535 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 USP17L5A8MUK1 530 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 CREB3O43889 395 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 SLIT3O75094 1523 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 FMNL1O95466 1100 aaPredicted RBP6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 ARID4AP29374 1257 aaPredicted RBP6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 TMEM164Q5U3C3 297 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 USP17L2Q6R6M4 530 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 PTF1AQ7RTS3 328 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 USP17L1Q7RTZ2 530 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 SCUBE3Q8IX30 993 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 GPKOWQ92917 476 aaPredicted RBP eCLIP6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 PRKD2Q9BZL6 878 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 CHMP4BQ9H444 224 aaKnown RBP6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 NWD2Q9ULI1 1742 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 SPG7Q9UQ90 795 aa6.12□□□□□ -1.43
GTF3C2-203ENST00000415683 PLCH1Q4KWH8 1693 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 TOPAZ1Q8N9V7 1692 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 NRKQ7Z2Y5 1582 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 PARD3Q8TEW0 1356 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 LZTS3O60299 673 aaPredicted RBP6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 SF3A1Q15459 793 aaKnown RBP6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 MSS51Q4VC12 460 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 CC2D1BQ5T0F9 858 aaKnown RBP6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 PDXDC2PQ6P474 469 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 CLEC4GQ6UXB4 293 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 MPRIPQ6WCQ1 1025 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 PHTF2Q8N3S3 785 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 FAM174AQ8TBP5 190 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 STK32AQ8WU08 396 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 MAF1Q9H063 256 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 MAP10Q9P2G4 905 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 POLKQ9UBT6 870 aa6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 NOVA2Q9UNW9 492 aaKnown RBP6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 MARF1Q9Y4F3 1742 aaKnown RBP6.11□□□□□ -1.43
GTF3C2-203ENST00000415683 FLT4P35916 1363 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 WASHC2AQ641Q2 1341 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 NRG2O14511 850 aaPredicted RBP6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 NR1I2O75469 434 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 SKIP12755 728 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 LIG1P18858 919 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 HMGB2P26583 209 aaKnown RBP6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 CALRP27797 417 aaKnown RBP6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 APLP1P51693 650 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 PPP4CP60510 307 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 ZFYVE27Q5T4F4 411 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 PHLDB3Q6NSJ2 640 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 CACTIN-AS1Q8N1I8 211 aa6.1□□□□□ -1.43
GTF3C2-203ENST00000415683 ARMC2Q8NEN0 867 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms