RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 GGA1Q9UJY5 639 aa31.86■■■□□ 2.69
HLA-C-204ENST00000415537 G3V3G9 751 aa31.85■■■□□ 2.69
HLA-C-204ENST00000415537 DCAF8Q5TAQ9 597 aa31.85■■■□□ 2.69
HLA-C-204ENST00000415537 LINS1Q8NG48 757 aa31.85■■■□□ 2.69
HLA-C-204ENST00000415537 ECE2O60344 883 aa31.84■■■□□ 2.69
HLA-C-204ENST00000415537 MKRN1Q9UHC7 482 aaKnown RBP31.84■■■□□ 2.69
HLA-C-204ENST00000415537 DOK7Q18PE1 504 aa31.83■■■□□ 2.69
HLA-C-204ENST00000415537 GPR101Q96P66 508 aaPredicted RBP31.83■■■□□ 2.69
HLA-C-204ENST00000415537 GREM2Q9H772 168 aa31.83■■■□□ 2.69
HLA-C-204ENST00000415537 SPEF2Q9C093 1822 aa31.82■■■□□ 2.68
HLA-C-204ENST00000415537 XDHP47989 1333 aa31.81■■■□□ 2.68
HLA-C-204ENST00000415537 PSMD14O00487 310 aa31.81■■■□□ 2.68
HLA-C-204ENST00000415537 CNOT7Q9UIV1 285 aaKnown RBP31.81■■■□□ 2.68
HLA-C-204ENST00000415537 H7C1D1 291 aa31.8■■■□□ 2.68
HLA-C-204ENST00000415537 RTL9Q8NET4 1388 aa31.8■■■□□ 2.68
HLA-C-204ENST00000415537 ZNF521Q96K83 1311 aa31.79■■■□□ 2.68
HLA-C-204ENST00000415537 PLA2G12BQ9BX93 195 aa31.79■■■□□ 2.68
HLA-C-204ENST00000415537 BSDC1Q9NW68 430 aaPredicted RBP31.79■■■□□ 2.68
HLA-C-204ENST00000415537 ZBTB12Q9Y330 459 aaPredicted RBP31.79■■■□□ 2.68
HLA-C-204ENST00000415537 F6X3S4 739 aa31.78■■■□□ 2.68
HLA-C-204ENST00000415537 ATP2B4P23634 1241 aa31.78■■■□□ 2.68
HLA-C-204ENST00000415537 DPF2Q92785 391 aa31.78■■■□□ 2.68
HLA-C-204ENST00000415537 CNTNAP1P78357 1384 aa31.78■■■□□ 2.68
HLA-C-204ENST00000415537 IGHMBP2P38935 993 aaKnown RBP31.77■■■□□ 2.68
HLA-C-204ENST00000415537 MICALL2Q8IY33 904 aa31.77■■■□□ 2.68
HLA-C-204ENST00000415537 CASP7P55210 303 aa31.76■■■□□ 2.67
HLA-C-204ENST00000415537 KCNQ5Q9NR82 932 aa31.76■■■□□ 2.67
HLA-C-204ENST00000415537 TRPM7Q96QT4 1865 aa31.76■■■□□ 2.67
HLA-C-204ENST00000415537 ITGA6P23229 1130 aa31.75■■■□□ 2.67
HLA-C-204ENST00000415537 RPS12P25398 132 aaKnown RBP31.75■■■□□ 2.67
HLA-C-204ENST00000415537 MINPP1Q9UNW1 487 aa31.75■■■□□ 2.67
HLA-C-204ENST00000415537 BEND3Q5T5X7 828 aa31.74■■■□□ 2.67
HLA-C-204ENST00000415537 ZC3H15Q8WU90 426 aaKnown RBP31.74■■■□□ 2.67
HLA-C-204ENST00000415537 ABT1Q9ULW3 272 aaKnown RBP31.74■■■□□ 2.67
HLA-C-204ENST00000415537 PCNTO95613 3336 aa31.74■■■□□ 2.67
HLA-C-204ENST00000415537 MPHOSPH8Q99549 860 aa31.73■■■□□ 2.67
HLA-C-204ENST00000415537 SCN9AQ15858 1988 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 SHTN1A0MZ66 631 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 E9PSI1 815 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 CSF1RP07333 972 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 HSPA1AP0DMV8 641 aaKnown RBP31.72■■■□□ 2.67
HLA-C-204ENST00000415537 HSPA1BP0DMV9 641 aaKnown RBP31.72■■■□□ 2.67
HLA-C-204ENST00000415537 DEFB115Q30KQ5 88 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 FAM161AQ3B820 660 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 TRPM4Q8TD43 1214 aa31.72■■■□□ 2.67
HLA-C-204ENST00000415537 TRAF5O00463 557 aa31.71■■■□□ 2.67
HLA-C-204ENST00000415537 HIRAP54198 1017 aaPredicted RBP31.71■■■□□ 2.67
HLA-C-204ENST00000415537 FMR1Q06787 632 aaKnown RBP eCLIP31.71■■■□□ 2.67
HLA-C-204ENST00000415537 PGAP2Q9UHJ9 254 aa31.71■■■□□ 2.67
HLA-C-204ENST00000415537 VIL1P09327 827 aaKnown RBP31.7■■■□□ 2.67
HLA-C-204ENST00000415537 CCT4P50991 539 aaKnown RBP31.7■■■□□ 2.67
HLA-C-204ENST00000415537 SLC4A10Q6U841 1118 aa31.7■■■□□ 2.67
HLA-C-204ENST00000415537 ANKRD18BA2A2Z9 1011 aa31.69■■■□□ 2.66
HLA-C-204ENST00000415537 VEGFBP49765 207 aa31.69■■■□□ 2.66
HLA-C-204ENST00000415537 SAMD7Q7Z3H4 446 aa31.69■■■□□ 2.66
HLA-C-204ENST00000415537 RASSF10A6NK89 507 aa31.68■■■□□ 2.66
HLA-C-204ENST00000415537 PODNQ7Z5L7 613 aa31.68■■■□□ 2.66
HLA-C-204ENST00000415537 ANKRD2Q9GZV1 360 aa31.68■■■□□ 2.66
HLA-C-204ENST00000415537 C9orf78Q9NZ63 289 aaPredicted RBP31.68■■■□□ 2.66
HLA-C-204ENST00000415537 CHMP3Q9Y3E7 222 aa31.68■■■□□ 2.66
HLA-C-204ENST00000415537 TBC1D10BQ4KMP7 808 aaPredicted RBP31.67■■■□□ 2.66
HLA-C-204ENST00000415537 RBM26Q5T8P6 1007 aaKnown RBP31.67■■■□□ 2.66
HLA-C-204ENST00000415537 IFFO2Q5TF58 517 aa31.67■■■□□ 2.66
HLA-C-204ENST00000415537 CDC37L1Q7L3B6 337 aa31.67■■■□□ 2.66
HLA-C-204ENST00000415537 GLIS2Q9BZE0 524 aaPredicted RBP31.67■■■□□ 2.66
HLA-C-204ENST00000415537 LEMD3Q9Y2U8 911 aa31.67■■■□□ 2.66
HLA-C-204ENST00000415537 PSME4Q14997 1843 aa31.67■■■□□ 2.66
HLA-C-204ENST00000415537 MED23Q9ULK4 1368 aa31.67■■■□□ 2.66
HLA-C-204ENST00000415537 GRM8O00222 908 aa31.66■■■□□ 2.66
HLA-C-204ENST00000415537 ALDH1L1O75891 902 aa31.66■■■□□ 2.66
HLA-C-204ENST00000415537 SRCIN1Q9C0H9 1055 aa31.66■■■□□ 2.66
HLA-C-204ENST00000415537 FOXO4P98177 505 aa31.65■■■□□ 2.66
HLA-C-204ENST00000415537 IFIT5Q13325 482 aaKnown RBP31.65■■■□□ 2.66
HLA-C-204ENST00000415537 CST9Q5W186 159 aa31.65■■■□□ 2.66
HLA-C-204ENST00000415537 WTIPA6NIX2 430 aaPredicted RBP31.64■■■□□ 2.66
HLA-C-204ENST00000415537 CCER2I3L3R5 266 aa31.64■■■□□ 2.66
HLA-C-204ENST00000415537 SLFN5Q08AF3 891 aa31.64■■■□□ 2.66
HLA-C-204ENST00000415537 RSBN1LQ6PCB5 846 aaPredicted RBP31.64■■■□□ 2.66
HLA-C-204ENST00000415537 AGBL3Q8NEM8 1001 aa31.64■■■□□ 2.66
HLA-C-204ENST00000415537 USP17L3A6NCW0 530 aa31.63■■■□□ 2.65
HLA-C-204ENST00000415537 USP17L4A6NCW7 530 aa31.63■■■□□ 2.65
HLA-C-204ENST00000415537 CELF2O95319 508 aaKnown RBP31.63■■■□□ 2.65
HLA-C-204ENST00000415537 PAXIP1Q6ZW49 1069 aaPredicted RBP31.63■■■□□ 2.65
HLA-C-204ENST00000415537 USP17L1Q7RTZ2 530 aa31.63■■■□□ 2.65
HLA-C-204ENST00000415537 ZNF804BA4D1E1 1349 aa31.62■■■□□ 2.65
HLA-C-204ENST00000415537 POLR2AP24928 1970 aaKnown RBP31.62■■■□□ 2.65
HLA-C-204ENST00000415537 KCNJ4P48050 445 aa31.62■■■□□ 2.65
HLA-C-204ENST00000415537 EGFRP00533 1210 aa31.61■■■□□ 2.65
HLA-C-204ENST00000415537 CHRNDQ07001 517 aa31.61■■■□□ 2.65
HLA-C-204ENST00000415537 KIF4BQ2VIQ3 1234 aa31.61■■■□□ 2.65
HLA-C-204ENST00000415537 LMBR1LQ6UX01 489 aa31.61■■■□□ 2.65
HLA-C-204ENST00000415537 MRPL50Q8N5N7 158 aaKnown RBP31.61■■■□□ 2.65
HLA-C-204ENST00000415537 DCPSQ96C86 337 aaKnown RBP31.61■■■□□ 2.65
HLA-C-204ENST00000415537 ZNF408Q9H9D4 720 aa31.61■■■□□ 2.65
HLA-C-204ENST00000415537 WDR33Q9C0J8 1336 aaKnown RBP31.6■■■□□ 2.65
HLA-C-204ENST00000415537 CCDC57Q2TAC2 916 aa31.6■■■□□ 2.65
HLA-C-204ENST00000415537 USP48Q86UV5 1035 aa31.6■■■□□ 2.65
HLA-C-204ENST00000415537 COA1Q9GZY4 146 aa31.6■■■□□ 2.65
HLA-C-204ENST00000415537 TLL2Q9Y6L7 1015 aa31.6■■■□□ 2.65
HLA-C-204ENST00000415537 TAF7LQ5H9L4 462 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms