RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
RAPGEF1-204ENST00000414781 HTTP42858 3142 aa17.72■□□□□ 0.43
RAPGEF1-204ENST00000414781 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
RAPGEF1-204ENST00000414781 CEP290O15078 2479 aa17.71■□□□□ 0.43
RAPGEF1-204ENST00000414781 EN2P19622 333 aaPredicted RBP17.71■□□□□ 0.43
RAPGEF1-204ENST00000414781 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
RAPGEF1-204ENST00000414781 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
RAPGEF1-204ENST00000414781 TMEM106CQ9BVX2 250 aa17.71■□□□□ 0.43
RAPGEF1-204ENST00000414781 POLR2AP24928 1970 aaKnown RBP17.71■□□□□ 0.43
RAPGEF1-204ENST00000414781 C6orf229H3BNL8 230 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 MYL6BP14649 208 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 NF2P35240 595 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 AGBL3Q8NEM8 1001 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 PNISRQ8TF01 805 aaKnown RBP17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 OTUD5Q96G74 571 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 R3HDMLQ9H3Y0 253 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 PTPN22Q9Y2R2 807 aa17.7■□□□□ 0.42
RAPGEF1-204ENST00000414781 RIMBP2O15034 1052 aa17.69■□□□□ 0.42
RAPGEF1-204ENST00000414781 MOB2Q70IA6 237 aa17.69■□□□□ 0.42
RAPGEF1-204ENST00000414781 LRRC37AA6NMS7 1700 aa17.69■□□□□ 0.42
RAPGEF1-204ENST00000414781 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
RAPGEF1-204ENST00000414781 H0YGN5 161 aa17.68■□□□□ 0.42
RAPGEF1-204ENST00000414781 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
RAPGEF1-204ENST00000414781 INHBEP58166 350 aa17.68■□□□□ 0.42
RAPGEF1-204ENST00000414781 ANKRD36CQ5JPF3 1778 aa17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 MRS2Q9HD23 443 aa17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 KCNQ5Q9NR82 932 aa17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
RAPGEF1-204ENST00000414781 SZT2Q5T011 3432 aa17.66■□□□□ 0.42
RAPGEF1-204ENST00000414781 MNX1P50219 401 aaPredicted RBP17.66■□□□□ 0.42
RAPGEF1-204ENST00000414781 MYOZ2Q9NPC6 264 aa17.66■□□□□ 0.42
RAPGEF1-204ENST00000414781 POLLQ9UGP5 575 aa17.66■□□□□ 0.42
RAPGEF1-204ENST00000414781 MANSC4A6NHS7 340 aaPredicted RBP17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 USP17L8P0C7I0 530 aa17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 RSBN1LQ6PCB5 846 aaPredicted RBP17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 ARMC9Q7Z3E5 817 aa17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 ZC3H12CQ9C0D7 883 aaKnown RBP17.65■□□□□ 0.42
RAPGEF1-204ENST00000414781 G3V3G9 751 aa17.64■□□□□ 0.41
RAPGEF1-204ENST00000414781 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
RAPGEF1-204ENST00000414781 SPRYD7Q5W111 196 aa17.64■□□□□ 0.41
RAPGEF1-204ENST00000414781 NLRP10Q86W26 655 aa17.64■□□□□ 0.41
RAPGEF1-204ENST00000414781 EFCC1Q9HA90 598 aa17.64■□□□□ 0.41
RAPGEF1-204ENST00000414781 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
RAPGEF1-204ENST00000414781 A0A0C4DFX4 3053 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 GPSM2P81274 684 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 NBPF11Q86T75 865 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 IFNL1Q8IU54 200 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 TBC1D16Q8TBP0 767 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 MIS18AQ9NYP9 233 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
RAPGEF1-204ENST00000414781 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
RAPGEF1-204ENST00000414781 LAMB2P55268 1798 aa17.61■□□□□ 0.41
RAPGEF1-204ENST00000414781 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
RAPGEF1-204ENST00000414781 CD99L2Q8TCZ2 262 aa17.61■□□□□ 0.41
RAPGEF1-204ENST00000414781 GMLQ99445 158 aa17.61■□□□□ 0.41
RAPGEF1-204ENST00000414781 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
RAPGEF1-204ENST00000414781 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
RAPGEF1-204ENST00000414781 SLC4A8Q2Y0W8 1093 aa17.6■□□□□ 0.41
RAPGEF1-204ENST00000414781 LDLRAD1Q5T700 205 aa17.6■□□□□ 0.41
RAPGEF1-204ENST00000414781 OTUD7BQ6GQQ9 843 aa17.6■□□□□ 0.41
RAPGEF1-204ENST00000414781 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
RAPGEF1-204ENST00000414781 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
RAPGEF1-204ENST00000414781 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
RAPGEF1-204ENST00000414781 SLC9C1Q4G0N8 1177 aa17.59■□□□□ 0.41
RAPGEF1-204ENST00000414781 PRAMEF18Q5VWM3 479 aa17.59■□□□□ 0.41
RAPGEF1-204ENST00000414781 LRP10Q7Z4F1 713 aa17.59■□□□□ 0.41
RAPGEF1-204ENST00000414781 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.4
RAPGEF1-204ENST00000414781 BRCA2P51587 3418 aa17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 CENPFP49454 3210 aa17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 UFL1O94874 794 aa17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 MMP14P50281 582 aa17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 SP3Q02447 781 aa17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 RANBP2P49792 3224 aaKnown RBP17.57■□□□□ 0.4
RAPGEF1-204ENST00000414781 KDM3BQ7LBC6 1761 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 A0A1W2PPC1 479 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 USP17L3A6NCW0 530 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 USP17L4A6NCW7 530 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 IGF2BP3O00425 579 aaKnown RBP eCLIP17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 NBPF9Q3BBW0 867 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 USP17L1Q7RTZ2 530 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 APOBEC3FQ8IUX4 373 aaKnown RBP17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 OGFOD1Q8N543 542 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 SLC10A4Q96EP9 437 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 SCAF8Q9UPN6 1271 aaKnown RBP17.56■□□□□ 0.4
RAPGEF1-204ENST00000414781 SCN9AQ15858 1988 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms