RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SH3BP5LQ7L8J4 393 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 DEFB132Q7Z7B7 95 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 TRIM50Q86XT4 487 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 DZIP3Q86Y13 1208 aaKnown RBP6.62□□□□□ -1.35
VPS41-205ENST00000414632 CLP1Q92989 425 aaKnown RBP6.62□□□□□ -1.35
VPS41-205ENST00000414632 UNC93B1Q9H1C4 597 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 BTAF1O14981 1849 aa6.62□□□□□ -1.35
VPS41-205ENST00000414632 NHSQ6T4R5 1651 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 TNS2Q63HR2 1409 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 NSD2O96028 1365 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 INSRP06213 1382 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 ZPR1O75312 459 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 TRIM37O94972 964 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 CLDN10P78369 228 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 NBPF6Q5VWK0 638 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 TRAF7Q6Q0C0 670 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
VPS41-205ENST00000414632 ZNF594Q96JF6 807 aaPredicted RBP6.61□□□□□ -1.35
VPS41-205ENST00000414632 NBPF4Q96M43 638 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 DNAAF2Q9NVR5 837 aaKnown RBP6.61□□□□□ -1.35
VPS41-205ENST00000414632 POLKQ9UBT6 870 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 NUP188Q5SRE5 1749 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 PKD1L3Q7Z443 1732 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 TOGARAM1Q9Y4F4 1720 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 RREB1Q92766 1687 aa6.61□□□□□ -1.35
VPS41-205ENST00000414632 OVOS2A0A0G2JMS6 1433 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 ITGB4P16144 1822 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 MAGEB6P1A0A0J9YX57 407 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 TLL1O43897 1013 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 ADH1BP00325 375 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 IL2RBP14784 551 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 ATP2B4P23634 1241 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 SF3B2Q13435 895 aaKnown RBP6.6□□□□□ -1.35
VPS41-205ENST00000414632 THSD4Q6ZMP0 1018 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 PTF1AQ7RTS3 328 aa6.6□□□□□ -1.35
VPS41-205ENST00000414632 CCDC85AQ96PX6 553 aaPredicted RBP6.6□□□□□ -1.35
VPS41-205ENST00000414632 EXOC5O00471 708 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 ZBTB7BO15156 539 aaPredicted RBP6.59□□□□□ -1.35
VPS41-205ENST00000414632 GIGYF1O75420 1035 aaPredicted RBP6.59□□□□□ -1.35
VPS41-205ENST00000414632 ATP1A2P50993 1020 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 EIF4A2Q14240 407 aaKnown RBP6.59□□□□□ -1.35
VPS41-205ENST00000414632 SWI5Q1ZZU3 235 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 FAM196AQ6ZSG2 479 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 LARGE2Q8N3Y3 721 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 DDX54Q8TDD1 881 aaKnown RBP6.59□□□□□ -1.35
VPS41-205ENST00000414632 ACSBG1Q96GR2 724 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 DOLKQ9UPQ8 538 aa6.59□□□□□ -1.35
VPS41-205ENST00000414632 KIF24Q5T7B8 1368 aa6.58□□□□□ -1.36
VPS41-205ENST00000414632 OXLD1Q5BKU9 147 aa6.58□□□□□ -1.36
VPS41-205ENST00000414632 BAP1Q92560 729 aa6.58□□□□□ -1.36
VPS41-205ENST00000414632 MTRQ99707 1265 aa6.58□□□□□ -1.36
VPS41-205ENST00000414632 RGPD3A6NKT7 1758 aaPredicted RBP6.57□□□□□ -1.36
VPS41-205ENST00000414632 RGPD4Q7Z3J3 1758 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 KCNQ2O43526 872 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 DKK1O94907 266 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 APBA3O96018 575 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 TATP17735 454 aaPredicted RBP6.57□□□□□ -1.36
VPS41-205ENST00000414632 SCNN1AP37088 669 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 ZEB1P37275 1124 aaPredicted RBP6.57□□□□□ -1.36
VPS41-205ENST00000414632 BAG6P46379 1132 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 MTHFSP49914 203 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 GTF2IP78347 998 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 DDX10Q13206 875 aaKnown RBP6.57□□□□□ -1.36
VPS41-205ENST00000414632 AGERQ15109 404 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 EZH2Q15910 746 aaKnown RBP6.57□□□□□ -1.36
VPS41-205ENST00000414632 ERFEQ4G0M1 354 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 SH3RF1Q7Z6J0 888 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
VPS41-205ENST00000414632 RAPGEF4Q8WZA2 1011 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 ZNF516Q92618 1163 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 SLC6A16Q9GZN6 736 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 KIAA1024Q9UPX6 916 aa6.57□□□□□ -1.36
VPS41-205ENST00000414632 COL3A1P02461 1466 aaPredicted RBP6.56□□□□□ -1.36
VPS41-205ENST00000414632 SOWAHDA6NJG2 315 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 SERPINB4P48594 390 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 SEC13P55735 322 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 RNF20Q5VTR2 975 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 CCDC102BQ68D86 513 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 NYAP1Q6ZVC0 841 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 CCDC125Q86Z20 511 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 SIX5Q8N196 739 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 ZCRB1Q8TBF4 217 aaKnown RBP6.56□□□□□ -1.36
VPS41-205ENST00000414632 FOXJ1Q92949 421 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 SYTL4Q96C24 671 aaPredicted RBP6.56□□□□□ -1.36
VPS41-205ENST00000414632 KCTD12Q96CX2 325 aaKnown RBP6.56□□□□□ -1.36
VPS41-205ENST00000414632 RBM19Q9Y4C8 960 aaKnown RBP6.56□□□□□ -1.36
VPS41-205ENST00000414632 NCAPD2Q15021 1401 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 LY75O60449 1722 aa6.56□□□□□ -1.36
VPS41-205ENST00000414632 TUBGCP6Q96RT7 1819 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 SCN11AQ9UI33 1791 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 PRMT3O60678 531 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 HMOX1P09601 288 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 TJAP1Q5JTD0 557 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 ZNF511Q8NB15 262 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 PRIMPOLQ96LW4 560 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 PCDHGA11Q9Y5H2 935 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 NPC1L1Q9UHC9 1359 aa6.55□□□□□ -1.36
VPS41-205ENST00000414632 IGSF1Q8N6C5 1336 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms