RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 TRPM2O94759 1503 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 KRT13P13646 458 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CAMK4Q16566 473 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 KIF1BO60333 1816 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CALML3P27482 149 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 CDCA7Q9BWT1 371 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 TCERG1LQ5VWI1 586 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 NAP1L3Q99457 506 aaPredicted RBP12.11□□□□□ -0.47
SCN5A-204ENST00000414099 USP25Q9UHP3 1055 aa12.11□□□□□ -0.47
SCN5A-204ENST00000414099 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
SCN5A-204ENST00000414099 DDB1Q16531 1140 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 NOS1P29475 1434 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 SEPT6Q14141 434 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 CCDC6Q16204 474 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 CCDC117Q8IWD4 279 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-204ENST00000414099 SPDYE3A6NKU9 549 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 UBE3BQ7Z3V4 1068 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 PUF60Q9UHX1 559 aaKnown RBP12.1□□□□□ -0.47
SCN5A-204ENST00000414099 CEP83Q9Y592 693 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 ODF2LQ9ULJ1 636 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 CNGA1P29973 690 aa12.1□□□□□ -0.47
SCN5A-204ENST00000414099 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
SCN5A-204ENST00000414099 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
SCN5A-204ENST00000414099 SPAG1Q07617 926 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 NME9Q86XW9 330 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 SRRTQ9BXP5 876 aaKnown RBP12.09□□□□□ -0.47
SCN5A-204ENST00000414099 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 BRPF3Q9ULD4 1205 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
SCN5A-204ENST00000414099 PHACTR2O75167 634 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 GAS8O95995 478 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 MXRA7P84157 204 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 PRPF4BQ13523 1007 aaKnown RBP12.09□□□□□ -0.47
SCN5A-204ENST00000414099 BRDTQ58F21 947 aaPredicted RBP12.09□□□□□ -0.47
SCN5A-204ENST00000414099 FSIP1Q8NA03 581 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 URB2Q14146 1524 aaKnown RBP12.09□□□□□ -0.47
SCN5A-204ENST00000414099 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 SWAP70Q9UH65 585 aa12.09□□□□□ -0.47
SCN5A-204ENST00000414099 DYNC1I1O14576 645 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 NDC80O14777 642 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 LIG1P18858 919 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 TNPO1Q92973 898 aaKnown RBP12.08□□□□□ -0.48
SCN5A-204ENST00000414099 NAP1L4Q99733 375 aaKnown RBP12.08□□□□□ -0.48
SCN5A-204ENST00000414099 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
SCN5A-204ENST00000414099 ADGBQ8N7X0 1667 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
SCN5A-204ENST00000414099 SNX16P57768 344 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 IDI1Q13907 227 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 GMNNO75496 209 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 FAM114A2Q9NRY5 505 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 NAA16Q6N069 864 aaPredicted RBP12.08□□□□□ -0.48
SCN5A-204ENST00000414099 A2MP01023 1474 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 TUBBP07437 444 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
SCN5A-204ENST00000414099 NEK1Q96PY6 1258 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 USP16Q9Y5T5 823 aa12.08□□□□□ -0.48
SCN5A-204ENST00000414099 ERCC6LQ2NKX8 1250 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 TMC6Q7Z403 805 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 HAUS2Q9NVX0 235 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 STAT6P42226 847 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 TSGA10Q9BZW7 698 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 VAT1LQ9HCJ6 419 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 UBE2HP62256 183 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 ACEP12821 1306 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 ATP5DP30049 168 aa12.07□□□□□ -0.48
SCN5A-204ENST00000414099 GABPB2Q8TAK5 448 aaPredicted RBP12.06□□□□□ -0.48
SCN5A-204ENST00000414099 C8orf37Q96NL8 207 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 IDEP14735 1019 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 IL2RBP14784 551 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 IL15P40933 162 aaPredicted RBP12.06□□□□□ -0.48
SCN5A-204ENST00000414099 TAF12Q16514 161 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 RTN1Q16799 776 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 RGS22Q8NE09 1264 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 SMARCC2Q8TAQ2 1214 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
SCN5A-204ENST00000414099 ZBTB43O43298 467 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 KIF5AQ12840 1032 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 RBM17Q96I25 401 aaKnown RBP12.06□□□□□ -0.48
SCN5A-204ENST00000414099 ABCC1P33527 1531 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 PLS1Q14651 629 aa12.06□□□□□ -0.48
SCN5A-204ENST00000414099 RRP36Q96EU6 259 aaKnown RBP12.06□□□□□ -0.48
SCN5A-204ENST00000414099 C14orf93Q9H972 538 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms