RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 RESTQ13127 1097 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 STOX1Q6ZVD7 989 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 DDX19AQ9NUU7 478 aaKnown RBP17.69■□□□□ 0.42
TTC39A-208ENST00000413473 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
TTC39A-208ENST00000413473 NR1I2O75469 434 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 TIMM10P62072 90 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 FOXO4P98177 505 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 SCRN1Q12765 414 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 ANO6Q4KMQ2 910 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 MYRIPQ8NFW9 859 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 BICD2Q8TD16 824 aa17.69■□□□□ 0.42
TTC39A-208ENST00000413473 GOLIM4O00461 696 aa17.68■□□□□ 0.42
TTC39A-208ENST00000413473 KIAA1524Q8TCG1 905 aa17.68■□□□□ 0.42
TTC39A-208ENST00000413473 MAP7D2Q96T17 732 aa17.68■□□□□ 0.42
TTC39A-208ENST00000413473 CLSTN2Q9H4D0 955 aa17.68■□□□□ 0.42
TTC39A-208ENST00000413473 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
TTC39A-208ENST00000413473 PYCARDQ9ULZ3 195 aa17.68■□□□□ 0.42
TTC39A-208ENST00000413473 NBPF26B4DH59 902 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 H7C1W4 665 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 TPM3P06753 285 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 NBPF10Q6P3W6 841 aaKnown RBP17.67■□□□□ 0.42
TTC39A-208ENST00000413473 ATG9AQ7Z3C6 839 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 NBPF15Q8N660 670 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 PRIMPOLQ96LW4 560 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 ALS2Q96Q42 1657 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 GOLGA6L6A8MZA4 724 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 ATF3P18847 181 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 RBM43Q6ZSC3 357 aaKnown RBP17.67■□□□□ 0.42
TTC39A-208ENST00000413473 PAG1Q9NWQ8 432 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
TTC39A-208ENST00000413473 TTLL7Q6ZT98 887 aa17.66■□□□□ 0.42
TTC39A-208ENST00000413473 DHX32Q7L7V1 743 aaKnown RBP17.66■□□□□ 0.42
TTC39A-208ENST00000413473 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
TTC39A-208ENST00000413473 PFKFB2O60825 505 aa17.66■□□□□ 0.42
TTC39A-208ENST00000413473 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
TTC39A-208ENST00000413473 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
TTC39A-208ENST00000413473 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
TTC39A-208ENST00000413473 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
TTC39A-208ENST00000413473 ARFGEF2Q9Y6D5 1785 aa17.65■□□□□ 0.42
TTC39A-208ENST00000413473 FOSBP53539 338 aa17.65■□□□□ 0.42
TTC39A-208ENST00000413473 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
TTC39A-208ENST00000413473 APOBRQ0VD83 1088 aa17.65■□□□□ 0.42
TTC39A-208ENST00000413473 HELLSQ9NRZ9 838 aa17.65■□□□□ 0.42
TTC39A-208ENST00000413473 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.42
TTC39A-208ENST00000413473 LLPHQ9BRT6 129 aaKnown RBP17.64■□□□□ 0.42
TTC39A-208ENST00000413473 CWC25Q9NXE8 425 aaPredicted RBP17.64■□□□□ 0.42
TTC39A-208ENST00000413473 A0A0G2JLW4 131 aa17.64■□□□□ 0.41
TTC39A-208ENST00000413473 PTGS1P23219 599 aa17.64■□□□□ 0.41
TTC39A-208ENST00000413473 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
TTC39A-208ENST00000413473 TSC1Q92574 1164 aa17.64■□□□□ 0.41
TTC39A-208ENST00000413473 CTDNEP1O95476 244 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
TTC39A-208ENST00000413473 DSCC1Q9BVC3 393 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 DNAJC25Q9H1X3 360 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 COL18A1P39060 1754 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 PALLDQ8WX93 1383 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 A1BGP04217 495 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
TTC39A-208ENST00000413473 IL15P40933 162 aaPredicted RBP17.63■□□□□ 0.41
TTC39A-208ENST00000413473 ZNF165P49910 485 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
TTC39A-208ENST00000413473 ZMYM1Q5SVZ6 1142 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 PPFIA3O75145 1194 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
TTC39A-208ENST00000413473 TRIM5Q9C035 493 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 GPR108Q9NPR9 543 aa17.63■□□□□ 0.41
TTC39A-208ENST00000413473 CCDC186Q7Z3E2 898 aa17.62■□□□□ 0.41
TTC39A-208ENST00000413473 MTERF4Q7Z6M4 381 aaKnown RBP17.62■□□□□ 0.41
TTC39A-208ENST00000413473 DRC7Q8IY82 874 aa17.62■□□□□ 0.41
TTC39A-208ENST00000413473 NAP1L2Q9ULW6 460 aaPredicted RBP17.62■□□□□ 0.41
TTC39A-208ENST00000413473 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
TTC39A-208ENST00000413473 E7EWF7 191 aa17.62■□□□□ 0.41
TTC39A-208ENST00000413473 EYA2O00167 538 aa17.62■□□□□ 0.41
TTC39A-208ENST00000413473 IFIT1P09914 478 aaKnown RBP17.62■□□□□ 0.41
TTC39A-208ENST00000413473 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
TTC39A-208ENST00000413473 ZBTB3Q9H5J0 574 aa17.62■□□□□ 0.41
TTC39A-208ENST00000413473 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
TTC39A-208ENST00000413473 CHST3Q7LGC8 479 aa17.61■□□□□ 0.41
TTC39A-208ENST00000413473 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
TTC39A-208ENST00000413473 NCOA5Q9HCD5 579 aaKnown RBP17.61■□□□□ 0.41
TTC39A-208ENST00000413473 AGXT2Q9BYV1 514 aa17.61■□□□□ 0.41
TTC39A-208ENST00000413473 NRBP1Q9UHY1 535 aa17.61■□□□□ 0.41
TTC39A-208ENST00000413473 RCOR1Q9UKL0 485 aa17.61■□□□□ 0.41
TTC39A-208ENST00000413473 A0A1B0GUL7 405 aa17.6■□□□□ 0.41
TTC39A-208ENST00000413473 ZNF75DP51815 510 aa17.6■□□□□ 0.41
TTC39A-208ENST00000413473 ARID3AQ99856 593 aa17.6■□□□□ 0.41
TTC39A-208ENST00000413473 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
TTC39A-208ENST00000413473 LAMA4Q16363 1823 aa17.6■□□□□ 0.41
TTC39A-208ENST00000413473 RNF113AO15541 343 aaKnown RBP17.6■□□□□ 0.41
TTC39A-208ENST00000413473 GTF2F1P35269 517 aaKnown RBP eCLIP17.6■□□□□ 0.41
TTC39A-208ENST00000413473 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
TTC39A-208ENST00000413473 MAST3O60307 1309 aa17.6■□□□□ 0.41
TTC39A-208ENST00000413473 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 TTLL5Q6EMB2 1281 aa17.59■□□□□ 0.41
TTC39A-208ENST00000413473 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
TTC39A-208ENST00000413473 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms