RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 ANKRD36CQ5JPF3 1778 aa23.33■■□□□ 1.33
LMO2-203ENST00000411482 RFX7Q2KHR2 1363 aa23.33■■□□□ 1.32
LMO2-203ENST00000411482 DIAPH3Q9NSV4 1193 aa23.33■■□□□ 1.32
LMO2-203ENST00000411482 MMP10P09238 476 aa23.32■■□□□ 1.32
LMO2-203ENST00000411482 ARXQ96QS3 562 aa23.32■■□□□ 1.32
LMO2-203ENST00000411482 DDR1Q08345 913 aa23.31■■□□□ 1.32
LMO2-203ENST00000411482 NFIXQ14938 502 aa23.31■■□□□ 1.32
LMO2-203ENST00000411482 ZNF34Q8IZ26 560 aa23.31■■□□□ 1.32
LMO2-203ENST00000411482 POLD1P28340 1107 aa23.3■■□□□ 1.32
LMO2-203ENST00000411482 CWC27Q6UX04 472 aaKnown RBP23.3■■□□□ 1.32
LMO2-203ENST00000411482 RGL2O15211 777 aa23.29■■□□□ 1.32
LMO2-203ENST00000411482 TBC1D9BQ66K14 1250 aa23.29■■□□□ 1.32
LMO2-203ENST00000411482 CLEC4GQ6UXB4 293 aa23.29■■□□□ 1.32
LMO2-203ENST00000411482 KIAA1211Q6ZU35 1233 aa23.29■■□□□ 1.32
LMO2-203ENST00000411482 BOLA2Q9H3K6 86 aa23.29■■□□□ 1.32
LMO2-203ENST00000411482 RAB3GAP1Q15042 981 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 FAM89AQ96GI7 184 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 HAUS7Q99871 368 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 DBNDD2Q9BQY9 259 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 POLRMTO00411 1230 aaKnown RBP23.28■■□□□ 1.32
LMO2-203ENST00000411482 NEK4P51957 841 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 CCDC57Q2TAC2 916 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 CWC22Q9HCG8 908 aaKnown RBP23.28■■□□□ 1.32
LMO2-203ENST00000411482 CHMP3Q9Y3E7 222 aa23.28■■□□□ 1.32
LMO2-203ENST00000411482 MCM4P33991 863 aa23.26■■□□□ 1.31
LMO2-203ENST00000411482 LRRC24Q50LG9 513 aa23.26■■□□□ 1.31
LMO2-203ENST00000411482 CLEC17AQ6ZS10 378 aa23.26■■□□□ 1.31
LMO2-203ENST00000411482 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.26■■□□□ 1.31
LMO2-203ENST00000411482 SNX14Q9Y5W7 946 aa23.26■■□□□ 1.31
LMO2-203ENST00000411482 ZNF609O15014 1411 aa23.26■■□□□ 1.31
LMO2-203ENST00000411482 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
LMO2-203ENST00000411482 HSP90AA1P07900 732 aaKnown RBP23.25■■□□□ 1.31
LMO2-203ENST00000411482 NMIQ13287 307 aaPredicted RBP23.25■■□□□ 1.31
LMO2-203ENST00000411482 CUL4AQ13619 759 aa23.25■■□□□ 1.31
LMO2-203ENST00000411482 TTLL11Q8NHH1 800 aa23.25■■□□□ 1.31
LMO2-203ENST00000411482 MED23Q9ULK4 1368 aa23.25■■□□□ 1.31
LMO2-203ENST00000411482 BICDL1Q6ZP65 573 aa23.24■■□□□ 1.31
LMO2-203ENST00000411482 MAP4K1Q92918 833 aa23.24■■□□□ 1.31
LMO2-203ENST00000411482 ZNF594Q96JF6 807 aaPredicted RBP23.24■■□□□ 1.31
LMO2-203ENST00000411482 PPP1R1BQ9UD71 204 aaPredicted RBP23.24■■□□□ 1.31
LMO2-203ENST00000411482 CCDC171Q6TFL3 1326 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 PTH1RQ03431 593 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 NECTIN1Q15223 517 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 FSD1Q9BTV5 496 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 PUS3Q9BZE2 481 aaKnown RBP23.23■■□□□ 1.31
LMO2-203ENST00000411482 TM6SF1Q9BZW5 370 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 FHDC1Q9C0D6 1143 aaPredicted RBP23.23■■□□□ 1.31
LMO2-203ENST00000411482 CEP126Q9P2H0 1117 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 PARP3Q9Y6F1 533 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 KIF13BQ9NQT8 1826 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 GPTP24298 496 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 IFIT5Q13325 482 aaKnown RBP23.23■■□□□ 1.31
LMO2-203ENST00000411482 FAM227BQ96M60 508 aa23.23■■□□□ 1.31
LMO2-203ENST00000411482 UBN2Q6ZU65 1347 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 PDE8AO60658 829 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 SERPINB2P05120 415 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 CTSWP56202 376 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 RASEFQ8IZ41 740 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 TMX3Q96JJ7 454 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 AKAP2Q9Y2D5 859 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 ZNF652Q9Y2D9 606 aa23.22■■□□□ 1.31
LMO2-203ENST00000411482 IRS4O14654 1257 aaPredicted RBP23.21■■□□□ 1.31
LMO2-203ENST00000411482 SYNE4Q8N205 404 aa23.21■■□□□ 1.31
LMO2-203ENST00000411482 INTS4Q96HW7 963 aaKnown RBP23.21■■□□□ 1.31
LMO2-203ENST00000411482 TTC14Q96N46 770 aa23.21■■□□□ 1.31
LMO2-203ENST00000411482 SETDB2Q96T68 719 aa23.21■■□□□ 1.31
LMO2-203ENST00000411482 TRMT112Q9UI30 125 aaKnown RBP23.21■■□□□ 1.31
LMO2-203ENST00000411482 RIPOR2Q9Y4F9 1068 aa23.21■■□□□ 1.31
LMO2-203ENST00000411482 MYH3P11055 1940 aa23.2■■□□□ 1.3
LMO2-203ENST00000411482 A0A0D9SFI3 127 aa23.2■■□□□ 1.3
LMO2-203ENST00000411482 CYP2E1P05181 493 aaPredicted RBP23.2■■□□□ 1.3
LMO2-203ENST00000411482 TIMM10P62072 90 aa23.2■■□□□ 1.3
LMO2-203ENST00000411482 PARP10Q53GL7 1025 aa23.2■■□□□ 1.3
LMO2-203ENST00000411482 KBTBD3Q8NAB2 608 aa23.2■■□□□ 1.3
LMO2-203ENST00000411482 TNPO1Q92973 898 aaKnown RBP23.2■■□□□ 1.3
LMO2-203ENST00000411482 NIP7Q9Y221 180 aaKnown RBP eCLIP23.2■■□□□ 1.3
LMO2-203ENST00000411482 SPEF2Q9C093 1822 aa23.2■■□□□ 1.3
LMO2-203ENST00000411482 A0A1B0GUL7 405 aa23.19■■□□□ 1.3
LMO2-203ENST00000411482 DEKP35659 375 aaKnown RBP23.19■■□□□ 1.3
LMO2-203ENST00000411482 NUCB2P80303 420 aa23.19■■□□□ 1.3
LMO2-203ENST00000411482 TSGA10IPQ3SY00 556 aa23.18■■□□□ 1.3
LMO2-203ENST00000411482 CD2APQ9Y5K6 639 aa23.18■■□□□ 1.3
LMO2-203ENST00000411482 CARMIL3Q8ND23 1372 aa23.18■■□□□ 1.3
LMO2-203ENST00000411482 EDC3Q96F86 508 aaKnown RBP23.18■■□□□ 1.3
LMO2-203ENST00000411482 NEUROD6Q96NK8 337 aa23.18■■□□□ 1.3
LMO2-203ENST00000411482 C10orf71Q711Q0 1435 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 ABCC12Q96J65 1359 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 ANKRD18BA2A2Z9 1011 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 ITGA6P23229 1130 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 NLGN2Q8NFZ4 835 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 GREM2Q9H772 168 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 ZSWIM6Q9HCJ5 1215 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 KIAA1551Q9HCM1 1747 aa23.17■■□□□ 1.3
LMO2-203ENST00000411482 ANKRD31Q8N7Z5 1873 aa23.16■■□□□ 1.3
LMO2-203ENST00000411482 RIC1Q4ADV7 1423 aa23.16■■□□□ 1.3
LMO2-203ENST00000411482 TAF5LO75529 589 aa23.16■■□□□ 1.3
LMO2-203ENST00000411482 PRR5LQ6MZQ0 368 aa23.16■■□□□ 1.3
LMO2-203ENST00000411482 UPF3BQ9BZI7 483 aaKnown RBP23.16■■□□□ 1.3
LMO2-203ENST00000411482 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms