RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 RXRBP28702 533 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 NRLP54845 237 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 PSMA6P60900 246 aaKnown RBP3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 MAP7D1Q3KQU3 841 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 KRT25Q7Z3Z0 450 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 CACTIN-AS1Q8N1I8 211 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 GLIS3Q8NEA6 775 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 RBSNQ9H1K0 784 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 FAM53CQ9NYF3 392 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 HCN4Q9Y3Q4 1203 aa3.32□□□□□ -1.88
RNU6-554P-201ENST00000410466 GHRHP01286 108 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 RARAP10276 462 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 HIRAP54198 1017 aaPredicted RBP3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 MLANAQ16655 118 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 CRTC2Q53ET0 693 aaPredicted RBP3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 COL26A1Q96A83 441 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 BORCS6Q96GS4 357 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 ZNF358Q9NW07 568 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 KCNK4Q9NYG8 393 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 ZFATQ9P243 1243 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 NDUFB9Q9Y6M9 179 aa3.31□□□□□ -1.88
RNU6-554P-201ENST00000410466 HOXA5P20719 270 aa3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 EPHA4P54764 986 aa3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 EIF4G2P78344 907 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 FDX2Q6P4F2 183 aa3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 ZNF574Q6ZN55 896 aaPredicted RBP3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 AMIGO3Q86WK7 504 aa3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 STK11IPQ8N1F8 1099 aa3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 ADAM19Q9H013 955 aa3.3□□□□□ -1.88
RNU6-554P-201ENST00000410466 LINC01387J3KSC0 135 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 GPR37L1O60883 481 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 PSME1Q06323 249 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 SGO2Q562F6 1265 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 AMER1Q5JTC6 1135 aaPredicted RBP3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 IER5Q5VY09 327 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 PAOXQ6QHF9 649 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 TNS4Q8IZW8 715 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 PLPP7Q8NBV4 271 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 UBASH3BQ8TF42 649 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 BCL7CQ8WUZ0 217 aaPredicted RBP3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 C20orf173Q96LM9 149 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 RNF208Q9H0X6 261 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 ZC3H7BQ9UGR2 993 aaKnown RBP3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 TRIM33Q9UPN9 1127 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 PCDHGA11Q9Y5H2 935 aa3.29□□□□□ -1.88
RNU6-554P-201ENST00000410466 LOC102724428A0A0B4J2F2 783 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 MEGF11A6BM72 1044 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 J3QW42 95 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 NFIBO00712 420 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 SUV39H1O43463 412 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 TARSP26639 723 aaKnown RBP3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 SIK1P57059 783 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 FAM117BQ6P1L5 589 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 SYDE1Q6ZW31 735 aaPredicted RBP3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 GGNQ86UU5 652 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 KLHL23Q8NBE8 558 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 IFT43Q96FT9 208 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 CARD10Q9BWT7 1032 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 LRRC4CQ9HCJ2 640 aa3.28□□□□□ -1.88
RNU6-554P-201ENST00000410466 FAM95CA0A1B0GW59 222 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 TGFBR3LH3BV60 316 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 FOXD2O60548 495 aaPredicted RBP3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 SASH3O75995 380 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 RNASE1P07998 156 aaKnown RBP3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 NFKBIBQ15653 356 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 TXNDC11Q6PKC3 985 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 ZSWIM9Q86XI8 627 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 SHISA5Q8N114 240 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 FOXD4L4Q8WXT5 416 aaPredicted RBP3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 TBC1D32Q96NH3 1257 aa3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 TLR7Q9NYK1 1049 aaKnown RBP3.27□□□□□ -1.89
RNU6-554P-201ENST00000410466 PSAPP07602 524 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 SYN1P17600 705 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 FUT4P22083 530 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 KCNMB1Q16558 191 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 DUSP27Q5VZP5 1158 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 CIAPIN1Q6FI81 312 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 POTEAQ6S8J7 498 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 SPRED2Q7Z698 418 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 ZAR1Q86SH2 424 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 ALDH16A1Q8IZ83 802 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 LRRN4CLQ8ND94 238 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 DDRGK1Q96HY6 314 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 NSUN5Q96P11 429 aaKnown RBP3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 RUSC1Q9BVN2 902 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 C11orf16Q9NQ32 467 aa3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 MBNL3Q9NUK0 354 aaKnown RBP3.26□□□□□ -1.89
RNU6-554P-201ENST00000410466 FAM170BA6NMN3 283 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 NPIPB6E9PJ23 425 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 APBB1O00213 710 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 FSCN2O14926 492 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 DDX3YO15523 660 aaKnown RBP3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 C1QTNF9P0C862 333 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 CDC25BP30305 580 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 GTF2IP78347 998 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 WFDC3Q8IUB2 231 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 MISP3Q96FF7 219 aa3.25□□□□□ -1.89
RNU6-554P-201ENST00000410466 TSPAN10Q9H1Z9 355 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms