RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TRIM28Q13263 835 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-202ENST00000409472 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.49
SCAMP4-202ENST00000409472 ZBTB38Q8NAP3 1195 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-202ENST00000409472 TEX13AQ9BXU3 409 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-202ENST00000409472 GPR108Q9NPR9 543 aa18.14■□□□□ 0.49
SCAMP4-202ENST00000409472 TBC1D2BQ9UPU7 963 aa18.14■□□□□ 0.49
SCAMP4-202ENST00000409472 STX6O43752 255 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 CYP21A2P08686 494 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 SCARF1Q14162 830 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 PI16Q6UXB8 463 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 GREM2Q9H772 168 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 CNPY2Q9Y2B0 182 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 LAMA4Q16363 1823 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 MCMDC2Q4G0Z9 681 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 STOX1Q6ZVD7 989 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 UBN2Q6ZU65 1347 aa18.13■□□□□ 0.49
SCAMP4-202ENST00000409472 ZNF445P59923 1031 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 RNF20Q5VTR2 975 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 LTBP4Q8N2S1 1624 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 MYH3P11055 1940 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 CSF1RP07333 972 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 IFIT1P09914 478 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 PHLPP1O60346 1717 aa18.12■□□□□ 0.49
SCAMP4-202ENST00000409472 STK3Q13188 491 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 USP48Q86UV5 1035 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 CEP126Q9P2H0 1117 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 MAST3O60307 1309 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 SYCE3A1L190 88 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 HSP90AB3PQ58FF7 597 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 PLA2G12BQ9BX93 195 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
SCAMP4-202ENST00000409472 F13A1P00488 732 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 PSMA5P28066 241 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 TTLL11Q8NHH1 800 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 HMG20BQ9P0W2 317 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 SPATA31A1Q5TZJ5 1347 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 M0R2C6 588 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.497e-6■■■■□ 25.4
SCAMP4-202ENST00000409472 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 TSGA10IPQ3SY00 556 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-202ENST00000409472 NUTM2BA6NNL0 878 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 NUTM2EB1AL46 878 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 ITGA6P23229 1130 aa18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 ZMYM1Q5SVZ6 1142 aa18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 NUTM2AQ8IVF1 878 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 RBSNQ9H1K0 784 aa18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
SCAMP4-202ENST00000409472 VPS37CA5D8V6 355 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 CTSWP56202 376 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 MARCH10Q8NA82 808 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 TRMT112Q9UI30 125 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 CDHR2Q9BYE9 1310 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 IRS4O14654 1257 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 FIBPO43427 364 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 CDC37L1Q7L3B6 337 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 OSBP2Q969R2 916 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
SCAMP4-202ENST00000409472 MYH14Q7Z406 1995 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-202ENST00000409472 DDB1Q16531 1140 aa18.07■□□□□ 0.48
SCAMP4-202ENST00000409472 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
SCAMP4-202ENST00000409472 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
SCAMP4-202ENST00000409472 MYO5AQ9Y4I1 1855 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-202ENST00000409472 FAM177BA6PVY3 158 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 FOXP2O15409 715 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 TTC39AQ5SRH9 613 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 RIPOR2Q9Y4F9 1068 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 AKAP11Q9UKA4 1901 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 ESPNB1AK53 854 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 JAK2O60674 1132 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 MBD3O95983 291 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 HSPD1P10809 573 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 ZAP70P43403 619 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 GORABQ5T7V8 394 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 FAM173BQ6P4H8 233 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 Q6ZUG5 572 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 FERMT3Q86UX7 667 aa18.06■□□□□ 0.48
SCAMP4-202ENST00000409472 RNF113AO15541 343 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-202ENST00000409472 ITPK1Q13572 414 aa18.05■□□□□ 0.48
SCAMP4-202ENST00000409472 METTL24Q5JXM2 366 aa18.05■□□□□ 0.48
SCAMP4-202ENST00000409472 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
SCAMP4-202ENST00000409472 HELLSQ9NRZ9 838 aa18.05■□□□□ 0.48
SCAMP4-202ENST00000409472 IL6STP40189 918 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-202ENST00000409472 ATP2B3Q16720 1220 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms