RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SNRPA1P09661 255 aaKnown RBP18.18■□□□□ 0.5
LIMS2-205ENST00000409455 POLA2Q14181 598 aa18.18■□□□□ 0.5
LIMS2-205ENST00000409455 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
LIMS2-205ENST00000409455 DDX21Q9NR30 783 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIMS2-205ENST00000409455 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
LIMS2-205ENST00000409455 GLRX3O76003 335 aaKnown RBP18.18■□□□□ 0.5
LIMS2-205ENST00000409455 FAM173BQ6P4H8 233 aa18.18■□□□□ 0.5
LIMS2-205ENST00000409455 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
LIMS2-205ENST00000409455 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-205ENST00000409455 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
LIMS2-205ENST00000409455 N4BP2Q86UW6 1770 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-205ENST00000409455 SRGAP3O43295 1099 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 PTH1RQ03431 593 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 PTPN14Q15678 1187 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 KMT5BQ4FZB7 885 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 BEND3Q5T5X7 828 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 LRRC8AQ8IWT6 810 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 TTC41PQ6P2S7 1318 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 ADCY9O60503 1353 aa18.17■□□□□ 0.5
LIMS2-205ENST00000409455 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 HSP90AB4PQ58FF6 505 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 BICD2Q8TD16 824 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 ZNF215Q9UL58 517 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-205ENST00000409455 TPCN1Q9ULQ1 816 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 MYL6BP14649 208 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
LIMS2-205ENST00000409455 KCNB2Q92953 911 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 TMEM51Q9NW97 253 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 MAP3K2Q9Y2U5 619 aa18.16■□□□□ 0.5
LIMS2-205ENST00000409455 LEO1Q8WVC0 666 aaPredicted RBP18.15■□□□□ 0.5
LIMS2-205ENST00000409455 ERO1AQ96HE7 468 aa18.15■□□□□ 0.5
LIMS2-205ENST00000409455 USP42Q9H9J4 1324 aaKnown RBP18.15■□□□□ 0.5
LIMS2-205ENST00000409455 CDK11BP21127 795 aaKnown RBP18.15■□□□□ 0.5
LIMS2-205ENST00000409455 RBM6P78332 1123 aaKnown RBP18.15■□□□□ 0.5
LIMS2-205ENST00000409455 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
LIMS2-205ENST00000409455 NR1I2O75469 434 aa18.14■□□□□ 0.49
LIMS2-205ENST00000409455 KCNJ4P48050 445 aa18.14■□□□□ 0.49
LIMS2-205ENST00000409455 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-205ENST00000409455 TFIP11Q9UBB9 837 aaKnown RBP18.14■□□□□ 0.49
LIMS2-205ENST00000409455 PSMA5P28066 241 aa18.14■□□□□ 0.49
LIMS2-205ENST00000409455 PIP4K2AP48426 406 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-205ENST00000409455 SLFNL1Q499Z3 407 aa18.14■□□□□ 0.49
LIMS2-205ENST00000409455 SARM1Q6SZW1 724 aa18.14■□□□□ 0.49
LIMS2-205ENST00000409455 NYAP1Q6ZVC0 841 aa18.14■□□□□ 0.49
LIMS2-205ENST00000409455 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-205ENST00000409455 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
LIMS2-205ENST00000409455 ANKRD1Q15327 319 aa18.13■□□□□ 0.49
LIMS2-205ENST00000409455 MRFAP1L1Q96HT8 127 aa18.13■□□□□ 0.49
LIMS2-205ENST00000409455 SKILP12757 684 aa18.13■□□□□ 0.49
LIMS2-205ENST00000409455 FAM193AP78312 1265 aa18.13■□□□□ 0.49
LIMS2-205ENST00000409455 FBXO38Q6PIJ6 1188 aa18.13■□□□□ 0.49
LIMS2-205ENST00000409455 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.13■□□□□ 0.49
LIMS2-205ENST00000409455 V9GYY5 206 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-205ENST00000409455 USP27XA6NNY8 438 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 PTCD1O75127 700 aaKnown RBP18.12■□□□□ 0.49
LIMS2-205ENST00000409455 NBPF7P0C2Y1 421 aaPredicted RBP18.12■□□□□ 0.49
LIMS2-205ENST00000409455 ELF2Q15723 593 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 TIGD1Q96MW7 591 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 DISP2A7MBM2 1401 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 EXOC5O00471 708 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 CREB3L3Q68CJ9 461 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
LIMS2-205ENST00000409455 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
LIMS2-205ENST00000409455 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 CREBRFQ8IUR6 639 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 FAM53CQ9NYF3 392 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 SLU7O95391 586 aaKnown RBP18.11■□□□□ 0.49
LIMS2-205ENST00000409455 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
LIMS2-205ENST00000409455 LRP10Q7Z4F1 713 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 CLASRPQ8N2M8 674 aaKnown RBP18.11■□□□□ 0.49
LIMS2-205ENST00000409455 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 C5P01031 1676 aa18.11■□□□□ 0.49
LIMS2-205ENST00000409455 KIF2AO00139 706 aaPredicted RBP18.1■□□□□ 0.49
LIMS2-205ENST00000409455 CWF19L2Q2TBE0 894 aaKnown RBP18.1■□□□□ 0.49
LIMS2-205ENST00000409455 CALCOCO1Q9P1Z2 691 aa18.1■□□□□ 0.49
LIMS2-205ENST00000409455 ECHDC1Q9NTX5 307 aa18.1■□□□□ 0.49
LIMS2-205ENST00000409455 SPATA31A1Q5TZJ5 1347 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 PIGBQ92521 554 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 PGBD1Q96JS3 809 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 CCDC69A6NI79 296 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 ARID5BQ14865 1188 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 IQCB1Q15051 598 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 STX1AQ16623 288 aa18.09■□□□□ 0.49
LIMS2-205ENST00000409455 ERICH4A6NGS2 130 aa18.08■□□□□ 0.49
LIMS2-205ENST00000409455 BECN2A8MW95 431 aa18.08■□□□□ 0.49
LIMS2-205ENST00000409455 CCAR2Q8N163 923 aaKnown RBP18.08■□□□□ 0.49
LIMS2-205ENST00000409455 TRMT1Q9NXH9 659 aaKnown RBP18.08■□□□□ 0.49
LIMS2-205ENST00000409455 HIP1O00291 1037 aa18.08■□□□□ 0.48
LIMS2-205ENST00000409455 ZBTB22O15209 634 aa18.08■□□□□ 0.48
LIMS2-205ENST00000409455 IRX5P78411 483 aaPredicted RBP18.08■□□□□ 0.48
LIMS2-205ENST00000409455 FILIP1Q7Z7B0 1213 aa18.08■□□□□ 0.48
LIMS2-205ENST00000409455 ASAP1Q9ULH1 1129 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms